PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G532700.4.p
Common NamePRUPE_ppa002943mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 587aa    MW: 62359.1 Da    PI: 5.3792
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G532700.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.92.6e-09208253145
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHH CS
     Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwq 45 
                         r++W++ Ed+ l+ +v+++G g+W+ I r      Rt++q+  rw 
  Prupe.1G532700.4.p 208 RKKWSEAEDLELIAGVRRYGEGNWANILRGDFkGERTANQLSQRWK 253
                         789************************98522359**********7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.2E-14203260IPR009057Homeodomain-like
PROSITE profilePS5129416.229203260IPR017930Myb domain
SuperFamilySSF466895.38E-12204257IPR009057Homeodomain-like
SMARTSM007172.6E-8207258IPR001005SANT/Myb domain
PfamPF002491.2E-7208254IPR001005SANT/Myb domain
CDDcd116604.97E-14209257No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 587 aa     Download sequence    Send to blast
MVEKTKDPEK SYITEEDTAN LLQRYQAANV LHLLQEVAHS QDVKIDWNRL VEKTSTGISN  60
AREYQMLWRH LAYSEAFVDN FDNGAQPVDD DSDLEHELEA FPAVIGEDST EAAACVKVLM  120
ASGLPSDSTH RSGATVEAPL TINIPNGQPS RTHQNSQPPC SMQGMNITVP VSVQKQPLLA  180
MTTSTGATAE GGDANGSASN NMAPRKKRKK WSEAEDLELI AGVRRYGEGN WANILRGDFK  240
GERTANQLSQ RWKYIRKHHH QDLNVGGNSS NKLSEAQLAT RHAMSLALNM PSITANTIGT  300
AAGTNTHSKF GGTNATTNSL PSTAAEEELQ SQQGLKPAKP YQMGLLGSTS KSQLTSKKTL  360
TKPNSNTDGM VRATAVAAGA RIASPSDAAS LLKAAQAKNA VHVLPTVSTP LSTAVTPSAT  420
HPGSLKALPQ TSQHAPTNST LLSKQIKDVS CSLDSELGCT PTEQVQDGAV ISENGQNEEG  480
QKDKVDSPDQ KAELKNLSTS AENLVGSLDI KGDETDNIAG IGVQSEERQS AKDNETLCSL  540
KGDDPFAADS CENQSASEQQ IGLVSIVGDG CNGKQVLGKE ETGIKI*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1205209KKRKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G532700.4.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007222017.10.0uncharacterized protein LOC18793323
TrEMBLA0A251RHH70.0A0A251RHH7_PRUPE; Uncharacterized protein
STRINGEMJ232160.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.18e-87MYB_related family protein