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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Prupe.1G523000.1.p |
| Common Name | PRUPE_ppa009419mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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| Family |
HD-ZIP |
| Protein Properties |
Length: 294aa MW: 33288.8 Da PI: 5.7891 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.1G523000.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 61.7 | 1.1e-19 | 56 | 109 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++++eq+++Le+ Fe ++++ e++++LA++lgL+ rqV +WFqNrRa++k
Prupe.1G523000.1.p 56 KKRRLSSEQVKALERNFEVENKLEPERKAKLAEELGLQPRQVAIWFQNRRARWK 109
45689************************************************9 PP
|
| 2 | HD-ZIP_I/II | 129.6 | 1.3e-41 | 56 | 147 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
kkrrls+eqvk+LE++Fe e+kLeperK++la+eLglqprqva+WFqnrRAR+ktkqlE+dy Lk++yd lk + ++Le+++++L+e+l+
Prupe.1G523000.1.p 56 KKRRLSSEQVKALERNFEVENKLEPERKAKLAEELGLQPRQVAIWFQNRRARWKTKQLERDYGILKANYDGLKLNFDSLERQNKALAEKLR 146
9**************************************************************************************9997 PP
HD-ZIP_I/II 93 e 93
+
Prupe.1G523000.1.p 147 H 147
6 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 294 aa
Download sequence Send
to blast |
MKRFSSSSDS LGVLVSNFPP KEEEKHGKDN YGYSKEFQAM LDSLDQEDCG EEMTGKKRRL 60
SSEQVKALER NFEVENKLEP ERKAKLAEEL GLQPRQVAIW FQNRRARWKT KQLERDYGIL 120
KANYDGLKLN FDSLERQNKA LAEKLRHLKA KLCRDTAESN GSAKEESPIS MCKSSIMEQS 180
RHQDFSDNGD NAEVNLFKNL KSKDGSSDSD SNGVMKEESN GNSSLGYNNG HSSLSSNSMV 240
NWFQLSDSRS VAGKGFQTQL VRMEEQSLFS TEESCNFFSV DQAPTLHWYS AEQ*
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| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 103 | 111 | RRARWKTKQ |
