PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G503600.1.p
Common NamePRUPE_ppa020634mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 437aa    MW: 48283.4 Da    PI: 9.7924
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G503600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.88.3e-05200222223
                         EETTTTEEESSHHHHHHHHHH.T CS
             zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                         +Cp Cg+ F   +nL+ H+ + H
  Prupe.1G503600.1.p 200 SCPECGEIFMKAENLELHQAVrH 222
                         8******************9888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.182199227IPR007087Zinc finger, C2H2
PROSITE patternPS000280199222IPR007087Zinc finger, C2H2
SuperFamilySSF563992.21E-22224434No hitNo description
Gene3DG3DSA:3.90.228.103.3E-14225433IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    Send to blast
MATSKLKTQR KPNKQIHQKA QKQNQNQNQK PQKTEKPPYW SVVRGLLTCK HLQPLQLQQE  60
RKQQLLQQQQ QHEQAMEESN AAKKSKKMRC SGSLCNNTKI MHRPEIGSPD VHKKRASMGS  120
SNSNETSSRS MKAPLHELNG VVSTSSSSLS AVSTNNSTVG GGSFRAMPFR RFSGCYECRM  180
VVDPVLGFAR DPSLRGSICS CPECGEIFMK AENLELHQAV RHAVSELGPE DTSKNIVEII  240
FQSSWLKKQT PICKIDRILK VHNTQKTISK FEEYRESIKA KATKLPKKHP RCIADGNELL  300
RFHSTTFVCS LGLNGSSNLC NSIPHCNICS IIKNGFNKFS GDLIEDGILT TATSGRAHDK  360
AVVAAEDNGK RAMLVCRVIA GRVKKNMEDS IGIGPIGMEE YDSVAGAVGV YSNLDELYVF  420
NPKAILPCFV VIYGGF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G503600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007224337.10.0uncharacterized protein LOC18790788
TrEMBLM5XJ180.0M5XJ18_PRUPE; Uncharacterized protein
STRINGEMJ255360.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF84732128
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-103C2H2-like zinc finger protein