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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Prupe.1G482700.1.p |
Common Name | PRUPE_ppa002480mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
FAR1 |
Protein Properties |
Length: 669aa MW: 77965 Da PI: 6.7813 |
Description |
FAR1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.1G482700.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FAR1 | 73.8 | 3.8e-23 | 57 | 141 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
+fYn Y+ke GF +r+s+s +++ +e +++++ Cs g++++++ + ++r+etrtgC a++++++ ++++w++ ++eleHnH+++
Prupe.1G482700.1.p 57 DFYNIYGKEQGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKKSEAN-----NPRPETRTGCPAMVVIRLVDSKRWRIVEVELEHNHQVS 141
6*********************999*****************99888.....9**********************************987 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 669 aa
Download sequence Send
to blast |
MEEVCLNSEP VFEEGDDYEL EGDFTEHDNV TGETQRRKDP TAPTVGLEFD SFDEAYDFYN 60 IYGKEQGFGI RVSNSWFRSK RKERYRAKLS CSSAGFKKKS EANNPRPETR TGCPAMVVIR 120 LVDSKRWRIV EVELEHNHQV SPQIKRFYKS HKKMILAAKS AQPLPEPVTE IHTIKLYRTP 180 VMDVGSNGYS NFTESEGLNS IDLSKHLELK EGDAHAVYNY FCRMKLMNPN FYYLMDLDDD 240 GHLRNVFWAD ARSRAAYGYF CDTVAIDTTC LSNKYEIPLI SFVGVNHHGQ SVLLGCGFLG 300 HESVENFVWM LRAWLKCMLG QPPQVLITDQ CKPLQIAVSE VIPNARHCYC LWYIMQKVPE 360 KLGGLKGYEA IKRQLHKSVY NSLKIAEFET SWAEMVKCHE LGENRWLQIL YEDRQMWVPV 420 YLKDTFFSGM IPIQENESLT AFFDGYVHKH TSFKEFVDKY DLALHRKRMK EVVADLESRS 480 SSFELKTKCN FEVQLCKVYT REIFKRFQLE VEGMYSCFNT RQVSVNGPII TYIVKERVEV 540 EGKEKEVRCY EVLYETTQVD IRCICSLFNY KGYLCRHALN VLNYNGVEEV PSRYILPRWR 600 KDFKCRYLLH HGSSNIDVYN PVYWHNHLYK LALPVAEEGA QSEEHYKTTL QALEELLNKF 660 HLVEDTLV*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in hypocotyls, rosette and cauline leaves, inflorescences stems, flowers and siliques. {ECO:0000269|PubMed:15591448}. |
Functional Description ? help
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Source |
Description |
UniProt | Putative transcription activator involved in regulating light control of development. May have a role in controlling flowering time. {ECO:0000269|PubMed:15591448}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Up-regulated in hypocotyls by far-red light treatment. {ECO:0000269|PubMed:15591448}. |