PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G464400.1.p
Common NamePRUPE_ppa026483mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 151aa    MW: 17240.2 Da    PI: 9.823
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G464400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.44.8e-104590254
                 AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
                        +y+G+r      +WvAeI++p   +kr r++lg++ t    a+a++ a  +l+
  Prupe.1G464400.1.p 45 QYRGIRM----RKWVAEIKEP---NKRSRIWLGSYTTLVATARAYDTAVFYLR 90
                        7999985....55*******8...337********************998876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.40E-2044101No hitNo description
Gene3DG3DSA:3.30.730.101.0E-2144100IPR001471AP2/ERF domain
SMARTSM003808.7E-2445105IPR001471AP2/ERF domain
PROSITE profilePS5103215.4884599IPR001471AP2/ERF domain
SuperFamilySSF541713.27E-134599IPR016177DNA-binding domain
PRINTSPR003672.5E-64657IPR001471AP2/ERF domain
PfamPF008471.0E-44690IPR001471AP2/ERF domain
PRINTSPR003672.5E-681101IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    Send to blast
MEGEYGCSPS SSSLTTSIEK RKQRQNQQQQ QQVGGNHDHR HQEKQYRGIR MRKWVAEIKE  60
PNKRSRIWLG SYTTLVATAR AYDTAVFYLR CPSARLNFPE LKATEVGEKV DAVETAHRSP  120
ISQSKTTSSL VNFHKLDLNK YLDPENSNEN *
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G464400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007223577.13e-70ethylene-responsive transcription factor ERF011
RefseqXP_007223578.13e-70ethylene-responsive transcription factor ERF011
RefseqXP_021820292.13e-70ethylene-responsive transcription factor ERF011-like
SwissprotQ9FH944e-33ERF10_ARATH; Ethylene-responsive transcription factor ERF010
TrEMBLM5XS411e-109M5XS41_PRUPE; Uncharacterized protein
STRINGEMJ283511e-110(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF129032106
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67190.19e-35DREB and EAR motif protein 2
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]