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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.1G424000.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 100aa MW: 11082.7 Da PI: 6.5112 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 14.7 | 5.6e-05 | 43 | 64 | 34 | 55 |
TTS-STCHHHHHHHHHHHHHHH CS HLH 34 pskKlsKaeiLekAveYIksLq 55 +++K++ +++Le+Av+Y+k Lq Prupe.1G424000.1.p 43 NGTKVDLSTMLEEAVDYVKFLQ 64 5699*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:4.10.280.10 | 1.8E-6 | 38 | 72 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 5.89E-7 | 38 | 79 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 3.77E-5 | 38 | 68 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 100 aa Download sequence Send to blast |
MEGELQTTKH HHQPALNFHG KARTSRAAAT DPESLYARNL VPNGTKVDLS TMLEEAVDYV 60 KFLQLQIKLL SSDDTWMYAP IAYIGMDIGL NLQKISPLL* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.1G424000.1.p |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011459816.1 | 2e-39 | PREDICTED: transcription factor bHLH85-like | ||||
Swissprot | Q7XHI9 | 9e-38 | BH084_ARATH; Transcription factor bHLH84 | ||||
TrEMBL | A0A251RBD8 | 8e-68 | A0A251RBD8_PRUPE; Uncharacterized protein | ||||
STRING | EMJ27521 | 2e-51 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF807 | 33 | 121 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G14760.1 | 4e-40 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.1G424000.1.p |