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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Prupe.1G419000.1.p |
Common Name | PRUPE_ppa019623mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
GRF |
Protein Properties |
Length: 592aa MW: 63720.6 Da PI: 8.9002 |
Description |
GRF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.1G419000.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRC | 77.8 | 1.1e-24 | 210 | 254 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45
d+epgrCrRtDGKkWRC+r++++++k+CErH++rgr+rsrk++e+
Prupe.1G419000.1.p 210 DPEPGRCRRTDGKKWRCWRDAVPDQKYCERHMNRGRHRSRKPVEP 254
79****************************************985 PP
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2 | QLQ | 62.5 | 1.1e-21 | 144 | 180 | 1 | 37 |
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37
++FT++Q+++L++Q+l+yKy+ an+P+P++Ll +i+k
Prupe.1G419000.1.p 144 GPFTPSQWMELEHQALIYKYITANVPIPSNLLIPIKK 180
59*********************************86 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 592 aa
Download sequence Send
to blast |
MDFGVVGFDG LGGAAAGTGF ASLASSSSDQ ETKHKWYGSG FHKQGRSAGT VEEDWRSSKL 60 PKTDDFLSAS KTMPNNSTHF SDGQQLLSFS NSPNSEAVLV DKSTQNASLP YFHQPLSAYN 120 RSTGHNTGSF NGAAMHWDIA GVRGPFTPSQ WMELEHQALI YKYITANVPI PSNLLIPIKK 180 ALDSAFPNGL PRPNTLGWGS IHLGFSNNTD PEPGRCRRTD GKKWRCWRDA VPDQKYCERH 240 MNRGRHRSRK PVEPVAGTTA AATTTTTTSK QLMSSASSSA SSVSIPAGGG SSSLSIANQQ 300 LKSLQPAASN SSAATQMNRM FMNKENVGER MHQTPGPSML SKENPFFIQK QQMGYEESSR 360 TEFGLVPSDS LLNPSQKGSS LMSCRNYGSS SQNLTDPAET NSQQHSLRHF IDDWPKNQSN 420 RPAISWPDQF DMQSDRTQLS ISIPIASSDF IPSTSSTNNE KLTLSPLRLS RELNPKPMGL 480 GVGSALNAQN NKQANWIPIS WETSLGGPLG EVLHHTNNNT AAECKNSSVL NLMTEGWDKN 540 SPSSLGSSPT GVLQKTAFGS LSNSSAGSSP RAENNNLLGS SILDSSSLPA L*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AM473368 | 2e-45 | AM473368.1 Vitis vinifera, whole genome shotgun sequence, contig VV78X262323.6, clone ENTAV 115. |