PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G406500.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family Nin-like
Protein Properties Length: 368aa    MW: 41674.5 Da    PI: 4.4868
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G406500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK78.38.6e-25279329252
              RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                         +++++l+dl+ y +lpi++AA+ L+vc+Tv+KriCR++G++RWP+Rki+s+
  Prupe.1G406500.1.p 279 TANMTLDDLRDYVHLPIEKAARRLNVCPTVVKRICRRNGLRRWPSRKITSI 329
                         789*********************************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.427269349IPR003035RWP-RK domain
Gene3DG3DSA:1.10.10.104.8E-4271323IPR011991Winged helix-turn-helix DNA-binding domain
PfamPF020423.6E-22281329IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    Send to blast
MTDPRAVVPY HDPYDSGPYT EIMNLLNDSE HPRIDENNIP PLETPMFDEE IQDVDEPLMD  60
QAMWDFIYGS DNGGEGINSR AGPSQIFTES SGTNPPRGDG NERNHGFGNV RPLSVWPLSS  120
DPINCTFCQV FREIVHFNSD NVMKLEIHGR LGVISHAILQ SRPNANVNSS GNHQYQMLDF  180
CKTPGEEVKQ FLMQYCLERK LEGYIMQQDP LTFFYEALCV GMDWDAILNP PDDFDFPPSP  240
PDSGTAGDME QPAAVQPEAA EHEIETNPRI SLAEQRERTA NMTLDDLRDY VHLPIEKAAR  300
RLNVCPTVVK RICRRNGLRR WPSRKITSIN RQISRLRPSL DSDDAETRVH AEAEISRLER  360
EIAELVP*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G406500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016647903.10.0PREDICTED: uncharacterized protein LOC107880544
TrEMBLA0A251RAV20.0A0A251RAV2_PRUPE; Uncharacterized protein
STRINGEMJ256926e-97(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF74782846
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59580.22e-14Nin-like family protein