PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 324aa MW: 35570.6 Da PI: 8.6102

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.1G387800.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.1	7.2e-32	141	194	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH++Fv+av+ LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ Prupe.1G387800.1.p 141 PRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 194 9****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	1.56E-15	138	195	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	4.7E-28	139	195	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.1E-23	141	194	IPR006447	Myb domain, plants
Pfam	PF00249	2.0E-7	142	193	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0080060	Biological Process	integument development
GO:0005618	Cellular Component	cell wall
GO:0005634	Cellular Component	nucleus
GO:0044212	Molecular Function	transcription regulatory region DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence Send to blast
MYLMNPIKRT STSPLPDLSL QISPPSAADN QYHQADIGLS RKALYSTDRS STTDSGSSGS 60 DLSHENGFYH LERSTGYNLS SADEPKLSLG FEMKDHMSLP PVQLPRNFSN HHFHHHPQIY 120 GRQFKRNART VGNVKRSIRA PRMRWTTTLH AHFVHAVQLL GGHERATPKS VLELMNVKDL 180 TLAHVKSHLQ MYRTVKSTDN KGTGHEGQTD MGLNQKPGIN GGLSCDKANR GSWPSSSETN 240 GSCNLSPGNA LTYSHSPQSN GTKVEEEESG RHVCDDGVGM KERGTTLACG SLSASDMYLN 300 LEFTLGRPTA EWTVLNSLNL QMT*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	2e-16	142	196	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	2e-16	142	196	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	1e-16	142	196	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	1e-16	142	196	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	1e-16	142	196	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	1e-16	142	196	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	2e-16	142	196	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	2e-16	142	196	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	2e-16	142	196	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	2e-16	142	196	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	2e-16	142	196	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	2e-16	142	196	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00107	PBM	Transfer from AT5G42630	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.1G387800.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KP283472	0.0	KP283472.1 Prunus armeniaca aberrant testa shape (ATS) gene, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020410100.1	0.0	probable transcription factor KAN4
TrEMBL	A0A251RA19	0.0	A0A251RA19_PRUPE; Uncharacterized protein
STRING	XP_008220727.1	0.0	(Prunus mume)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF4463	33	58

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42630.1	1e-55	G2-like family protein

Link Out ? help Back to Top
Phytozome	Prupe.1G387800.1.p