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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.1G383200.3.p | ||||||||
Common Name | PRUPE_ppa007090mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 329aa MW: 36383.7 Da PI: 5.272 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 62.1 | 1.7e-19 | 11 | 117 | 4 | 128 |
NAM 4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 + F+ tdeel L k ++g++l+ +vi++++ y++ P++Lp + wyf +++++k t+ gyW+++g+ +++s Prupe.1G383200.3.p 11 DIGFQCTDEELC-ISLGKIISGSPLPG-NVIEDANPYQLVPSNLP------DGFWYFIHSNENK---------PTNFGYWRTKGEACRIFS 84 56799******9.66***********9.99**************9......3568888887654.........4778************** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +g + tL fy+g+ap+ +ktdWvm+ey l Prupe.1G383200.3.p 85 -NSSITGWRATLEFYQGQAPNESKTDWVMQEYWL 117 .999****************************87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.31E-23 | 6 | 122 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 23.972 | 8 | 136 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.2E-10 | 11 | 116 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 329 aa Download sequence Send to blast |
MCPQSATLPA DIGFQCTDEE LCISLGKIIS GSPLPGNVIE DANPYQLVPS NLPDGFWYFI 60 HSNENKPTNF GYWRTKGEAC RIFSNSSITG WRATLEFYQG QAPNESKTDW VMQEYWLTQK 120 KLSEDSKAKV SKDNERGTLI VTERVPDHDV QIMPEIDYVS RGDYLELLDL DTPASFSFSS 180 DSSCLTMSSD ECFDSLALLE ELEPKNSQDL VNKNAGCKFS ISAPPRPDEL VIFAASSGSF 240 SKSPSEERVK THSPIPGSAV CGKISGKTSN NMNRIQKPDC RNEGGPSTSH NVDVSPSSHT 300 ASQEGKRRAR TIGRTEKLKK KYFCFMPF* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.1G383200.3.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007223100.1 | 0.0 | NAC domain-containing protein 79 | ||||
Refseq | XP_020410597.1 | 0.0 | NAC domain-containing protein 79 | ||||
TrEMBL | A0A251R9S8 | 0.0 | A0A251R9S8_PRUPE; Uncharacterized protein | ||||
STRING | EMJ24299 | 0.0 | (Prunus persica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36160.1 | 8e-17 | NAC domain containing protein 76 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.1G383200.3.p |
Entrez Gene | 18791355 |