PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G372100.1.p
Common NamePRUPE_ppa023248mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 256aa    MW: 28137.6 Da    PI: 7.0619
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G372100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.67.2e-194291255
                 AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                         ykGVr++  +g+WvAeIr+p   + r +r +lg+f+t  eAa a++aa++kl+g
  Prupe.1G372100.1.p 42 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFDTSHEAASAYDAAARKLYG 91
                        69****999.**********8...3.35************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.57E-2241101No hitNo description
PROSITE profilePS5103222.34299IPR001471AP2/ERF domain
SuperFamilySSF541712.81E-2142100IPR016177DNA-binding domain
PfamPF008471.9E-134291IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-3042101IPR001471AP2/ERF domain
SMARTSM003802.4E-3442105IPR001471AP2/ERF domain
PRINTSPR003671.1E-94354IPR001471AP2/ERF domain
PRINTSPR003671.1E-96581IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    Send to blast
MLKSEMSSVK VGERKQVKRP AQASSRKGCM RGKGGPENAM CTYKGVRQRT WGKWVAEIRE  60
PNRGARLWLG TFDTSHEAAS AYDAAARKLY GSQAKLNLPD QYHHQVPSSA NTHMLSQTPN  120
PSAQLTLLHQ NPSGTSSACL SNDYAAPLND VAVPVLRDHF PNVKAHQPHG TYPEPKPEAE  180
HSKMKVEENM SGNEGMESGI FWGNVSGNFP MFDDSIWVEA AMSLDFPVIE DHGIFSSNFV  240
DGSVWEPLQP SPWCV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-174399360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00240DAPTransfer from AT1G75490Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G372100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020425999.10.0dehydration-responsive element-binding protein 2D
TrEMBLM5XPZ20.0M5XPZ2_PRUPE; Uncharacterized protein
STRINGEMJ275910.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF25623380
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.15e-43ERF family protein