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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Prupe.1G371500.1.p |
Common Name | PRUPE_ppa019307mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
SRS |
Protein Properties |
Length: 373aa MW: 40034.2 Da PI: 6.2201 |
Description |
SRS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.1G371500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF702 | 226.1 | 6.6e-70 | 128 | 283 | 3 | 153 |
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa........aeaaskrkrelkskkqsa 85
s +++CqdCGnqakkdC h+RCRtCCksrgf+C+thvkstWvpaakrrerq+q + +++++++++ + +++kr+re+ + + +
Prupe.1G371500.1.p 128 SSGMNCQDCGNQAKKDCPHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQEQFSGLQQNQQQQEqqqqqlqfRGDNPKRQRES-QGGAGS 217
5689*************************************************9998888777765667777666777777775.777889 PP
DUF702 86 lsstklssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153
l++ +l+s++s le +++P+evss+avfrcvrvs++dd+++++aYqtav+igGhvfkG+LydqG++
Prupe.1G371500.1.p 218 LACVRLPSNTSG--LELAQFPSEVSSPAVFRCVRVSAMDDADDQYAYQTAVNIGGHVFKGLLYDQGPD 283
999999998765..89999***********************************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 373 aa
Download sequence Send
to blast |
MAGLFCLGGR DQAPTSSSKQ EGRGGGGGDQ ERVEGGGGNL YLYRSSNEGQ AEIYNKGFEI 60 WPSQYHHPHQ NLNYYSFGVD PSYNRRHLHN DDHDHNHNDV VSADDLSSGL RLAVMRQGGG 120 GGLGGSSSSG MNCQDCGNQA KKDCPHMRCR TCCKSRGFQC QTHVKSTWVP AAKRRERQEQ 180 FSGLQQNQQQ QEQQQQQLQF RGDNPKRQRE SQGGAGSLAC VRLPSNTSGL ELAQFPSEVS 240 SPAVFRCVRV SAMDDADDQY AYQTAVNIGG HVFKGLLYDQ GPDGQYYPSS STGGGGESSS 300 GGRHDHQEGG GAHPHHQQHN LVTVAATAGT TSHGGNPSTT LLDPSLFPTP LNAFMAEEEE 360 GLGSGGGEDD YD*
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