PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Prupe.1G341300.3.p

Common Name

PRUPE_ppa003517mg

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 567aa MW: 61671.8 Da PI: 6.8156

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.1G341300.3.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.5	0.00028	462	494	18	55
HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ L++++ + +K + a++L +A++YIk Lq Prupe.1G341300.3.p 462 DRITALQQIVSPF-----GKTDTASVLYEAIQYIKFLQ 494 6788888888887.....8******************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	10.76	444	493	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	4.32E-9	459	502	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	7.5E-8	459	500	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	6.16E-4	462	498	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 567 aa Download sequence Send to blast
MAEECRESTS CVAISSSSPQ LAQPNWWDLH AAAGAGAAGS QLSSWSNLGI NPWQPQPPQQ 60 QPNQKYSNSS NNCDDVDQDV SISSTSFTNA SNHSSLSVDS SRRLQVADQR SASPNNDMIN 120 GEQVSDNHIW NHVLLSVNGN SDLHHNDHDV GENFLDALSS KSLSTDHVMY EPACDYLKKL 180 DNSTWEFTKY VSAASNNFNS FEKQLNGGFM ENNNMNNNVN IENERLTKLS NLVSTWSIAP 240 PEPQLVMDHD HHHYLKPQAF INNDSTSCDA QMGNNNITNR NSGSSLFSCY GSKVEAACVA 300 GGGGGGALHG ITPSFGNNTN GIEYQIGLNN VNAMVADHHN GKYFYGNGSI LPDSYSSCGA 360 TSAGARNFAD VISFSSRLGN KSALVDIHAP KPCFKSSNLS DQYSKKQASS TRVSSGRGQG 420 IANEGKKKRT DDTSSETVLK KPKQETSTVS SSVKAPKVKL GDRITALQQI VSPFGKTDTA 480 SVLYEAIQYI KFLQDQVHVL LSSPYLKTNS HKDPWATDRK DHKGDAKVDL KNKGLCLVPI 540 SCTPQVYREN TGSDYWTPTY RGCLYR*

Sequence ? help Back to Top

Protein Sequence Length: 567 aa Download sequence Send to blast

MAEECRESTS CVAISSSSPQ LAQPNWWDLH AAAGAGAAGS QLSSWSNLGI NPWQPQPPQQ  60
QPNQKYSNSS NNCDDVDQDV SISSTSFTNA SNHSSLSVDS SRRLQVADQR SASPNNDMIN  120
GEQVSDNHIW NHVLLSVNGN SDLHHNDHDV GENFLDALSS KSLSTDHVMY EPACDYLKKL  180
DNSTWEFTKY VSAASNNFNS FEKQLNGGFM ENNNMNNNVN IENERLTKLS NLVSTWSIAP  240
PEPQLVMDHD HHHYLKPQAF INNDSTSCDA QMGNNNITNR NSGSSLFSCY GSKVEAACVA  300
GGGGGGALHG ITPSFGNNTN GIEYQIGLNN VNAMVADHHN GKYFYGNGSI LPDSYSSCGA  360
TSAGARNFAD VISFSSRLGN KSALVDIHAP KPCFKSSNLS DQYSKKQASS TRVSSGRGQG  420
IANEGKKKRT DDTSSETVLK KPKQETSTVS SSVKAPKVKL GDRITALQQI VSPFGKTDTA  480
SVLYEAIQYI KFLQDQVHVL LSSPYLKTNS HKDPWATDRK DHKGDAKVDL KNKGLCLVPI  540
SCTPQVYREN TGSDYWTPTY RGCLYR*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.1G341300.3.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_007222467.1	0.0	transcription factor bHLH111
TrEMBL	A0A251R7F5	0.0	A0A251R7F5_PRUPE; Uncharacterized protein
STRING	EMJ23666	0.0	(Prunus persica)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31050.1	9e-57	bHLH family protein

Link Out ? help Back to Top
Phytozome	Prupe.1G341300.3.p
Entrez Gene	18791617