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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Prupe.1G331600.1.p |
| Common Name | PRUPE_ppa004950mg |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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| Family |
C2H2 |
| Protein Properties |
Length: 485aa MW: 53162.1 Da PI: 6.0993 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.1G331600.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 17.4 | 1.2e-05 | 124 | 146 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+Cp+Cg+sF++ ++ +H t+
Prupe.1G331600.1.p 124 YECPICGQSFRSEDEVSVHVDTC 146
99*****************9887 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 485 aa
Download sequence Send
to blast |
MGDKFKEFIK NPFSSSSSGK FKGQGRVLGS SSSGPANSAL LRQSQAPQSK PKPNPVSNSN 60
SNSSSSAASP NPKPSPQKTQ NLDQNKPEFS NNSKPNRKEN GFDPFDSLIT PGKRSQNGYT 120
LNVYECPICG QSFRSEDEVS VHVDTCVNTS VDNKSAEGLG VSGSEDIGVG SSRSELEARI 180
GTFASGNPAT GSVEVVLRLL RNIVKEPENV KFRKIRMSNP KIREAIGEVV GGIELLEFVG 240
FELKEEEGEM WAMMEVPSEE QISLMKNGIA LLEPPKVQEL QKIENSPSID TPKVDEQIEP 300
KKVDRQTKVF FSVSESVAAR IELPESFYNL SAMELKREAE TRKKKIEDSQ MLIPRSYKEK 360
QAKAAKNRYR RTVVRIQFPD GVVLQGVFSP WESTSSLYEY VSSALKEPSL EFELLNPVAI 420
KRRVIPHFPR AGEKAATLAD EDLVPSALVK FKPIETDSVV FTGLCNELLE ISEPLTSGSA 480
VAPV*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5ifs_A | 1e-11 | 322 | 451 | 23 | 146 | Tether containing UBX domain for GLUT4 |
| 5ifs_C | 1e-11 | 322 | 451 | 23 | 146 | Tether containing UBX domain for GLUT4 |
| 5ifw_A | 4e-12 | 322 | 451 | 23 | 146 | Tether containing UBX domain for GLUT4 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Facilitates the interaction of SYP31 and CDC48A, thereby regulating an CDC48A membrane-associated function (Ref.8). Appears to act as a negative regulator mediating the powdery mildew-plant interaction (PubMed:19176722, PubMed:23301616). {ECO:0000269|PubMed:19176722, ECO:0000269|PubMed:23301616, ECO:0000269|Ref.8}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced in response to powdery mildew and by benzothiadiazole (BTH) treatment. {ECO:0000269|PubMed:19176722}. |
| Publications
? help Back to Top |
- Suzuki T,Park H,Till EA,Lennarz WJ
The PUB domain: a putative protein-protein interaction domain implicated in the ubiquitin-proteasome pathway.
Biochem. Biophys. Res. Commun., 2001. 287(5): p. 1083-7
[PMID:11587532] - Rancour DM,Park S,Knight SD,Bednarek SY
Plant UBX domain-containing protein 1, PUX1, regulates the oligomeric structure and activity of arabidopsis CDC48.
J. Biol. Chem., 2004. 279(52): p. 54264-74
[PMID:15498773] - Chandran D,Rickert J,Cherk C,Dotson BR,Wildermuth MC
Host cell ploidy underlying the fungal feeding site is a determinant of powdery mildew growth and reproduction.
Mol. Plant Microbe Interact., 2013. 26(5): p. 537-45
[PMID:23301616]
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