PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G317900.1.p
Common NamePRUPE_ppa023099mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ARR-B
Protein Properties Length: 641aa    MW: 71294.3 Da    PI: 5.9609
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G317900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like55.51.2e-17240289151
             G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                         kpr +WtpeLH +F  a++ L G  k  Pk+il+lm+v+ +t+ +v+SHLQ
  Prupe.1G317900.1.p 240 KPRAVWTPELHLKFTAALSAL-GDLKSRPKAILKLMNVPNITVRQVASHLQ 289
                         79*******************.9999************************* PP
2Response_reg554.5e-19211271108
                         EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHH CS
        Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalea 89 
                         +l+vd +   ++ +++ le+  + +v++++ ++ al ++ e++  + l++  i+mp+md l +l+ ++++e  +p+i+++++ + + a++a
  Prupe.1G317900.1.p  21 ILLVDHDIYSLMCIASTLEQYSF-KVTTTEMASVALSMITEQKddYKLVMANINMPDMDSLSFLRVLHKKE--IPVIFMSSEMNVNVAKKA 108
                         799*99*****************.***************666656***********************988..****************** PP

                         HHTTESEEEESS--HHHHH CS
        Response_reg  90 lkaGakdflsKpfdpeelv 108
                         l  Ga  fl+Kp++ e+l 
  Prupe.1G317900.1.p 109 LAEGACFFLEKPISLEDLK 127
                         ****************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23001.2E-2418141No hitNo description
SuperFamilySSF521726.12E-2418140IPR011006CheY-like superfamily
SMARTSM004486.2E-1219130IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011031.26620134IPR001789Signal transduction response regulator, receiver domain
PfamPF000721.3E-1521128IPR001789Signal transduction response regulator, receiver domain
CDDcd001568.88E-1822133No hitNo description
Gene3DG3DSA:1.10.10.604.8E-18237290IPR009057Homeodomain-like
SuperFamilySSF466892.87E-12239294IPR009057Homeodomain-like
TIGRFAMsTIGR015576.3E-16240290IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 641 aa     Download sequence    Send to blast
MEHMSRTETN GLPSFAHDLQ ILLVDHDIYS LMCIASTLEQ YSFKVTTTEM ASVALSMITE  60
QKDDYKLVMA NINMPDMDSL SFLRVLHKKE IPVIFMSSEM NVNVAKKALA EGACFFLEKP  120
ISLEDLKSVW QHVYRKIRTP MKYKHKPNYG TKMNSGKDCQ GMKINEAGDV LRPPLGGVKS  180
NGAGGECSLA TGHALDIDKQ NTSTLTCNAQ GASGIKLPID DKEEQEEVNR DSNGITGDKK  240
PRAVWTPELH LKFTAALSAL GDLKSRPKAI LKLMNVPNIT VRQVASHLQV SHLLISQEPI  300
ENLHALLPIS LILLTVLKRI YILSFQKYKN QVQRIRGTDT TSLPSSLSRL SNCINRNEFP  360
PAKQSSMVCQ YDQRTSSFGV RGNTAQLDAP NSLITSPIPV AGFNNHDYRR QNLYSGHTIL  420
SHYTNHHTNN PSEFYLRTQG QFQNLNQLRE TDSFGYGAGM NEIMNQQPLG IEENRFRTSE  480
SHFPSMNYIT PEAAASPYIS GNTFQVPNEP SVMNQEQYYT SSLTGPFDSQ NQNQFSTEGA  540
RLTTEVLELV PEQIASGNAT NPNKFPADFN DGSQKLDTTA GEASSPNKNQ PLSEYDELLK  600
LLEEDPQEAS CVGSVPNAGD PDRYCEWLRE TLLENSTDPL *
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G317900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020412567.10.0two-component response regulator ORR24
TrEMBLM5XWH80.0M5XWH8_PRUPE; Uncharacterized protein
STRINGEMJ260480.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF144041618
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68210.17e-42pseudo-response regulator 6