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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.1G284900.5.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 245aa MW: 28241.9 Da PI: 5.3789 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 104.3 | 1.6e-32 | 54 | 184 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..kvkaeekewyfFskrdkkyat.gkrknratksgyWkatgkd 89 +G+rF+P+++++vv+yL +k+ g++l+++++ike+ +y+++P +Lp k+ + +e ++F+ +++ y++ gk ++r+tksgyW g++ Prupe.1G284900.5.p 54 VGYRFDPSEDQIVVFYLFNKILGRELPINDIIKEISVYEHDPDELPsGdfKHGVDCNEAFYFAYTEQVYSSrGKITRRTTKSGYWDLDGEE 144 7*********************************************5444444466799********99963777888************* PP NAM 90 kevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +ev+ + ++ +v k++vf+kg+ap+g +td +mheyr+ Prupe.1G284900.5.p 145 EEVKYRnGDITVMFEKVMVFHKGTAPNGIETDFIMHEYRV 184 ***99845667999************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 33.928 | 52 | 213 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 6.41E-32 | 52 | 212 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.4E-15 | 54 | 184 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence Send to blast |
MASFRLLSWF LEPTQTQSRF IEQSFSHSSP TQTQTKAQCS KIENGKKEAE IHLVGYRFDP 60 SEDQIVVFYL FNKILGRELP INDIIKEISV YEHDPDELPS GDFKHGVDCN EAFYFAYTEQ 120 VYSSRGKITR RTTKSGYWDL DGEEEEVKYR NGDITVMFEK VMVFHKGTAP NGIETDFIMH 180 EYRVNPLIVP THVLNDSIRA KIERYVVCRI IQEGVSNFPL TNFHQDGLLG LLKKQNQIDM 240 TEIA* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 3e-22 | 48 | 210 | 10 | 165 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.1G284900.5.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007224054.2 | 1e-178 | NAC transcription factor 29 isoform X1 | ||||
TrEMBL | A0A251R4L6 | 0.0 | A0A251R4L6_PRUPE; Uncharacterized protein | ||||
STRING | XP_008221511.1 | 1e-157 | (Prunus mume) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69490.1 | 6e-27 | NAC-like, activated by AP3/PI |
Link Out ? help Back to Top | |
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Phytozome | Prupe.1G284900.5.p |