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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.1G284900.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 275aa MW: 31599.9 Da PI: 5.0805 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 103.9 | 2.1e-32 | 84 | 214 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..kvkaeekewyfFskrdkkyat.gkrknratksgyWkatgkd 89 +G+rF+P+++++vv+yL +k+ g++l+++++ike+ +y+++P +Lp k+ + +e ++F+ +++ y++ gk ++r+tksgyW g++ Prupe.1G284900.1.p 84 VGYRFDPSEDQIVVFYLFNKILGRELPINDIIKEISVYEHDPDELPsGdfKHGVDCNEAFYFAYTEQVYSSrGKITRRTTKSGYWDLDGEE 174 7*********************************************5444444466799********99963777888************* PP NAM 90 kevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +ev+ + ++ +v k++vf+kg+ap+g +td +mheyr+ Prupe.1G284900.1.p 175 EEVKYRnGDITVMFEKVMVFHKGTAPNGIETDFIMHEYRV 214 ***99845667999************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 9.02E-32 | 82 | 242 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 33.928 | 82 | 243 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.6E-15 | 84 | 214 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence Send to blast |
MASFRLLSWF LEPTQTQSRF IEQSFSHSSP TQTQTKAQVI IVLLFMALPC PQSTSQVPET 60 EKDFDLLKCS KIENGKKEAE IHLVGYRFDP SEDQIVVFYL FNKILGRELP INDIIKEISV 120 YEHDPDELPS GDFKHGVDCN EAFYFAYTEQ VYSSRGKITR RTTKSGYWDL DGEEEEVKYR 180 NGDITVMFEK VMVFHKGTAP NGIETDFIMH EYRVNPLIVP THVLNDSIRA KIERYVVCRI 240 IQEGVSNFPL TNFHQDGLLG LLKKQNQIDM TEIA* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 7e-22 | 78 | 243 | 10 | 168 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.1G284900.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007224054.2 | 0.0 | NAC transcription factor 29 isoform X1 | ||||
TrEMBL | A0A251R794 | 0.0 | A0A251R794_PRUPE; Uncharacterized protein | ||||
STRING | XP_008221511.1 | 0.0 | (Prunus mume) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF15772 | 6 | 11 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69490.1 | 8e-27 | NAC-like, activated by AP3/PI |
Link Out ? help Back to Top | |
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Phytozome | Prupe.1G284900.1.p |