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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.1G284800.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 226aa MW: 25753.8 Da PI: 4.4166 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 108.4 | 8.4e-34 | 38 | 170 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyat.gkrknratksgyWkatg 87 lp G+rF+P+++e+vv+yL +k+ +++l++++vike+ +y+++P +Lp+ k+ + +e ++F+ +++ y++ gk ++r+tksgyW g Prupe.1G284800.1.p 38 LPTGYRFDPSEDEIVVYYLFNKILDRELPITDVIKEISVYDHDPDELPNgdfKHGCDCNEAFYFTYTEQIYSSeGKITRRTTKSGYWDLDG 128 699*********************************************5444444467799********99963677777*********** PP NAM 88 kdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ev+ ++ +vg k++vf+kg+ap+g +td +mhe+rl Prupe.1G284800.1.p 129 EEEEVKYGnGDITVGFEKVMVFHKGTAPNGIETDFIMHEFRL 170 *****99746677***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.15E-34 | 36 | 199 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 37.169 | 38 | 199 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.1E-17 | 39 | 170 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 6.129 | 210 | 225 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence Send to blast |
MALSSPQSTS QVPETEKDFD LLKCSKIENG KKEADVDLPT GYRFDPSEDE IVVYYLFNKI 60 LDRELPITDV IKEISVYDHD PDELPNGDFK HGCDCNEAFY FTYTEQIYSS EGKITRRTTK 120 SGYWDLDGEE EEVKYGNGDI TVGFEKVMVF HKGTAPNGIE TDFIMHEFRL NPLIVPTHVL 180 NDSIRAKIER YVVCRIIHEG ISNYQPTFKL PPGWTARPVD EGEPN* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 3e-24 | 33 | 199 | 10 | 168 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.1G284800.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007224600.2 | 1e-167 | NAC transcription factor 29 | ||||
TrEMBL | A0A251R4L4 | 1e-166 | A0A251R4L4_PRUPE; Uncharacterized protein | ||||
STRING | XP_008221517.1 | 1e-164 | (Prunus mume) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF15772 | 6 | 11 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69490.1 | 2e-29 | NAC-like, activated by AP3/PI |
Link Out ? help Back to Top | |
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Phytozome | Prupe.1G284800.1.p |