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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.1G269200.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 627aa MW: 68355.6 Da PI: 7.0006 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 94.4 | 8.3e-30 | 279 | 337 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK kg+++pr+YYrCt + +Cpv+k+v+r+a+d +++++tYeg+Hnh+ Prupe.1G269200.2.p 279 HDGCQWRKYGQKIAKGNPCPRAYYRCTVSpSCPVRKQVQRCADDMSILITTYEGSHNHP 337 7**************************999****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.1E-31 | 263 | 339 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 5.75E-27 | 271 | 339 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 28.621 | 273 | 339 | IPR003657 | WRKY domain |
SMART | SM00774 | 3.8E-36 | 278 | 338 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.1E-26 | 280 | 337 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 627 aa Download sequence Send to blast |
MEMPKRCSKA MENNNTEENS FLGNTPVEDK TKKSDDGHDE EGTSMEMEIS KGGHGWLAEP 60 EQTNTLMPSS SAGKDRALLK HPQENELQSA KAKMGEVKEE NEKLKLLLSQ IVRNYQSLQM 120 HFLGLLQKDE EAKKSMDPSS SARDQSNEQD EEADELVSLS LGRSSSTDQP RKDEQMKKTS 180 HFSKNGKGDD QEGLNGAGLA LELGCRFEPA ADQSTEVVMK NSSSDNSCGD PKEDDPTEIW 240 PPSKTLKTTR SGDDEVSQQT HLKKARVSVR ARCDAPTMHD GCQWRKYGQK IAKGNPCPRA 300 YYRCTVSPSC PVRKQVQRCA DDMSILITTY EGSHNHPLPM SATAMASTTS AAASMLQSHS 360 SISQQGHTAM APISASTNLQ GLNFSTSTLS QNSRLPQHFY FPNSSISTTN SHPTITLDLT 420 APSPSHFGRF PAAVFSSNPR YPSTRLNFSS SPSSSLDHNN NTLQLQAPWN NNHTAADYLN 480 YGNRVLNQVG STLNMGKQSI FQEPNNLYQS YIQNQKPPPP PLPPPPHQQL MLTETIASAT 540 KTITSNPKFQ SALAAALTSF VGTNNGGSAT TGVRENHHHH QHQSSTSTES ASGLKLKWAE 600 SLTTNPIYPP SPNGIGCASS YLNKSS* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 2e-19 | 265 | 339 | 1 | 74 | WRKY transcription factor 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.1G269200.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020418088.1 | 0.0 | probable WRKY transcription factor 36 isoform X2 | ||||
TrEMBL | A0A251R4U0 | 0.0 | A0A251R4U0_PRUPE; Uncharacterized protein | ||||
STRING | XP_008221663.1 | 0.0 | (Prunus mume) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15130.1 | 4e-61 | WRKY DNA-binding protein 72 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.1G269200.2.p |