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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.1G269200.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 635aa MW: 69145.4 Da PI: 7.0006 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 94.4 | 8.4e-30 | 287 | 345 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK kg+++pr+YYrCt + +Cpv+k+v+r+a+d +++++tYeg+Hnh+ Prupe.1G269200.1.p 287 HDGCQWRKYGQKIAKGNPCPRAYYRCTVSpSCPVRKQVQRCADDMSILITTYEGSHNHP 345 7**************************999****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.1E-31 | 271 | 347 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 5.75E-27 | 279 | 347 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 28.621 | 281 | 347 | IPR003657 | WRKY domain |
SMART | SM00774 | 3.8E-36 | 286 | 346 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.2E-26 | 288 | 345 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 635 aa Download sequence Send to blast |
MPKRCSKAME NNNTEENSFL GNTPVEDKTK KSDDGHDEEG TSMEMEISKS SSSMDITIQG 60 GHGWLAEPEQ TNTLMPSSSA GKDRALLKHP QENELQSAKA KMGEVKEENE KLKLLLSQIV 120 RNYQSLQMHF LGLLQKDEEA KKSMDPSSSA RDQSNEQDEE ADELVSLSLG RSSSTDQPRK 180 DEQMKKTSHF SKNGKGDDQE GLNGAGLALE LGCRFEPAAD QSTEVVMKNS SSDNSCGDPK 240 EDDPTEIWPP SKTLKTTRSG DDEVSQQTHL KKARVSVRAR CDAPTMHDGC QWRKYGQKIA 300 KGNPCPRAYY RCTVSPSCPV RKQVQRCADD MSILITTYEG SHNHPLPMSA TAMASTTSAA 360 ASMLQSHSSI SQQGHTAMAP ISASTNLQGL NFSTSTLSQN SRLPQHFYFP NSSISTTNSH 420 PTITLDLTAP SPSHFGRFPA AVFSSNPRYP STRLNFSSSP SSSLDHNNNT LQLQAPWNNN 480 HTAADYLNYG NRVLNQVGST LNMGKQSIFQ EPNNLYQSYI QNQKPPPPPL PPPPHQQLML 540 TETIASATKT ITSNPKFQSA LAAALTSFVG TNNGGSATTG VRENHHHHQH QSSTSTESAS 600 GLKLKWAESL TTNPIYPPSP NGIGCASSYL NKSS* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 2e-19 | 273 | 347 | 1 | 74 | WRKY transcription factor 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.1G269200.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007226796.2 | 0.0 | probable WRKY transcription factor 36 isoform X1 | ||||
TrEMBL | A0A251R3S9 | 0.0 | A0A251R3S9_PRUPE; Uncharacterized protein | ||||
STRING | XP_008221663.1 | 0.0 | (Prunus mume) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF650 | 34 | 134 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15130.1 | 4e-61 | WRKY DNA-binding protein 72 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.1G269200.1.p |