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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Prupe.1G267300.2.p |
Common Name | PRUPE_ppa018002mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
HD-ZIP |
Protein Properties |
Length: 282aa MW: 31879.1 Da PI: 4.4495 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.1G267300.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 59.8 | 4.3e-19 | 44 | 98 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
k++++t +q++ Le+ Fe ++++ e++++LAk+lgL+ rqV +WFqNrRa+ k+
Prupe.1G267300.2.p 44 KKRRLTVDQVQFLEKNFEVENKLEPERKAQLAKELGLQPRQVAIWFQNRRARFKN 98
56689***********************************************995 PP
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2 | HD-ZIP_I/II | 127.5 | 5.5e-41 | 44 | 135 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
kkrrl+ +qv++LE++Fe e+kLeperK++la+eLglqprqva+WFqnrRAR+k+kqlEk+y++Lk+++d+lk+++++L ke+ +L++e++
Prupe.1G267300.2.p 44 KKRRLTVDQVQFLEKNFEVENKLEPERKAQLAKELGLQPRQVAIWFQNRRARFKNKQLEKEYDSLKASFDKLKADHDNLLKENGSLKNEID 134
9**************************************************************************************9987 PP
HD-ZIP_I/II 93 e 93
+
Prupe.1G267300.2.p 135 S 135
5 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 282 aa
Download sequence Send
to blast |
MGSNSMVHFE SASGEDSLDR SFFRPIDKEN GDDDYDASLN QPGKKRRLTV DQVQFLEKNF 60 EVENKLEPER KAQLAKELGL QPRQVAIWFQ NRRARFKNKQ LEKEYDSLKA SFDKLKADHD 120 NLLKENGSLK NEIDSLKDML ILKDKGKPGK RNLELHDANN IISSDVNPQS ATPNAAASDN 180 VPMVVCKQED ASSAKSDVFD SDSPHCTENH SSLLEPADSS HVFEPAEQSD FSQDEDDDLS 240 RTLLPPPYLK LEDSCYDEPP ASSNNFVFPM EDQQPFCFWP Y*
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