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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Prupe.1G267300.1.p |
Common Name | PRUPE_ppa018002mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
HD-ZIP |
Protein Properties |
Length: 322aa MW: 36193.9 Da PI: 4.4513 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.1G267300.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 59.5 | 5.3e-19 | 84 | 138 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
k++++t +q++ Le+ Fe ++++ e++++LAk+lgL+ rqV +WFqNrRa+ k+
Prupe.1G267300.1.p 84 KKRRLTVDQVQFLEKNFEVENKLEPERKAQLAKELGLQPRQVAIWFQNRRARFKN 138
56689***********************************************995 PP
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2 | HD-ZIP_I/II | 127.2 | 7.2e-41 | 84 | 175 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
kkrrl+ +qv++LE++Fe e+kLeperK++la+eLglqprqva+WFqnrRAR+k+kqlEk+y++Lk+++d+lk+++++L ke+ +L++e++
Prupe.1G267300.1.p 84 KKRRLTVDQVQFLEKNFEVENKLEPERKAQLAKELGLQPRQVAIWFQNRRARFKNKQLEKEYDSLKASFDKLKADHDNLLKENGSLKNEID 174
9**************************************************************************************9987 PP
HD-ZIP_I/II 93 e 93
+
Prupe.1G267300.1.p 175 S 175
5 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 322 aa
Download sequence Send
to blast |
MAGGKLYSAS DMNVIFQNEK LPCSSDVLES IWVPTSSSSF HGSNSMVHFE SASGEDSLDR 60 SFFRPIDKEN GDDDYDASLN QPGKKRRLTV DQVQFLEKNF EVENKLEPER KAQLAKELGL 120 QPRQVAIWFQ NRRARFKNKQ LEKEYDSLKA SFDKLKADHD NLLKENGSLK NEIDSLKDML 180 ILKDKGKPGK RNLELHDANN IISSDVNPQS ATPNAAASDN VPMVVCKQED ASSAKSDVFD 240 SDSPHCTENH SSLLEPADSS HVFEPAEQSD FSQDEDDDLS RTLLPPPYLK LEDSCYDEPP 300 ASSNNFVFPM EDQQPFCFWP Y*
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Nucleic Localization
Signal ? help
Back to Top |
 |
No. |
Start |
End |
Sequence |
1 | 131 | 139 | RRARFKNKQ |