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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Prupe.1G238200.1.p |
Common Name | PRUPE_ppa002679mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
ARR-B |
Protein Properties |
Length: 617aa MW: 69017.2 Da PI: 5.997 |
Description |
ARR-B family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.1G238200.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 76 | 4.9e-24 | 199 | 252 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
k+r++W+ +LH++Fv+av+q+ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl
Prupe.1G238200.1.p 199 KARVVWSVDLHQKFVKAVHQI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 252
68*******************.9*******************************8 PP
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2 | Response_reg | 81.4 | 3e-27 | 19 | 127 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHH CS
Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalea 89
vl+vdD+p+ +++l+++l+k y ev+++ +++al+ll+ek+ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + +
Prupe.1G238200.1.p 19 VLVVDDDPTWLKILEKMLKKCSY-EVTTCGLARDALNLLREKKdgYDIVVSDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKG 107
89*********************.***************999999**********************6644.8****************** PP
HHTTESEEEESS--HHHHHH CS
Response_reg 90 lkaGakdflsKpfdpeelvk 109
++ Ga d+l Kp+ ++el++
Prupe.1G238200.1.p 108 VQHGACDYLLKPIRMKELRN 127
*****************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0000160 | Biological Process | phosphorelay signal transduction system |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009735 | Biological Process | response to cytokinin |
GO:0010082 | Biological Process | regulation of root meristem growth |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 617 aa
Download sequence Send
to blast |
MESSFSSPRN DSFPAGLRVL VVDDDPTWLK ILEKMLKKCS YEVTTCGLAR DALNLLREKK 60 DGYDIVVSDV NMPDMDGFKL LEHVGLEMDL PVIMMSVDGE TSRVMKGVQH GACDYLLKPI 120 RMKELRNIWQ HVFRKKIHEI RDIESHESIE GIQLIRNGSD QYDEGYFFSA EDLTSSRKRK 180 DVDNKYDDKD FSDCSSAKKA RVVWSVDLHQ KFVKAVHQIG FDKVGPKKIL DLMNVPWLTR 240 ENVASHLQKY RLYLSRLQKE NDIKSSFGGT KHSDYSSKDL QGILSVQNSI NIQQNDVAHG 300 SYRFSGNNLV AQNADPKSNE GDIKGIVSEP VAEPKKGTTG NIPDSQKTRS SQMDFNSSYA 360 ETQKGLVGNV PDSQKIRSSQ MRVNHSFASV ESEVNLTAFD STIPATYSWN KIQLEKEHKP 420 LIQLNNGFSK PQLPGPQHHF QADQLQSIPS ISSRPSIPGG DVTGSSKSKP SYSEYTNHHG 480 SHVSPTISPT ISATDSFPGQ TKSCVVDHQL SETISTSTSN MKNQGINLST DLESAQRNLI 540 LGSTSPFASL DDEFQICWYQ GDCYGMNLEL QNVEFSEYTD PTHVTEVPAH LYDALRFEYP 600 CDPSEYSVLD QGLFIA*
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