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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Prupe.1G224900.1.p |
Common Name | PRUPE_ppa005013mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
SBP |
Protein Properties |
Length: 482aa MW: 52544.1 Da PI: 8.4001 |
Description |
SBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.1G224900.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SBP | 130.2 | 7.3e-41 | 185 | 261 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78
CqvegC+ dls+ak+yhr+h++C hsk+p+v+v+g+e+rfCqqCsrfh lsefDe+krsCrrrL++hn+rrrk+q+
Prupe.1G224900.1.p 185 CQVEGCNIDLSSAKDYHRKHRICANHSKSPKVIVEGVERRFCQQCSRFHGLSEFDEKKRSCRRRLSDHNARRRKPQT 261
**************************************************************************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0048510 | Biological Process | regulation of timing of transition from vegetative to reproductive phase |
GO:0048653 | Biological Process | anther development |
GO:0005634 | Cellular Component | nucleus |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 482 aa
Download sequence Send
to blast |
MNSVLLMEWN EKPPSLWDLE NLFMFGAKVT DNPKKLQPAD WGIEGERGMN SESFYSTGGD 60 GGSGVSGSDL GDGSSKSSKS ASVSSSVGES KKPNFNLDAF EGFPNDFIHK NESAKAEALG 120 SSPTHEVSAG SGEPLLSLKL GKRMYFEDVC AGNNPKSSSL SVISSSMAKT KRSKSTGQSA 180 FAPHCQVEGC NIDLSSAKDY HRKHRICANH SKSPKVIVEG VERRFCQQCS RFHGLSEFDE 240 KKRSCRRRLS DHNARRRKPQ TEALRNPTRL SSSLFSTDER QQMSLVLDQA PSVYTRHPSN 300 LTWDGTCSFK FGQTKEYFPK PAKGGGTGGQ LNLANNGIPS SITMLYHDSS GLSPSKGTAA 360 EVLNRGAEES MISFNLGATQ DFHRALSLLS TSSWVSGEAK PVALDNNTNQ NYQNNIPQPG 420 MQAMTQGLPV SSGYWQTQHL SLNTQEAHVS HSHSNGSNHF HQDLHQFKGP YEFGSQTNQF 480 N*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 240 | 257 | KKRSCRRRLSDHNARRRK |