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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Prupe.1G125700.3.p |
| Common Name | PRUPE_ppa002003mg |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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| Family |
FAR1 |
| Protein Properties |
Length: 403aa MW: 46607.2 Da PI: 7.091 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.1G125700.3.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 66.9 | 5.2e-21 | 53 | 146 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnH 87
+fY+++Ak++GFs+r+++++ + + +t+r+f+C + g+++ + +++ k +r+r+++r+gC+a +++ k+ +w+vt +++ HnH
Prupe.1G125700.3.p 53 EFYCSFAKQCGFSIRRHRTRGKdGVGRGVTRRDFTCHRGGYPQMKPSEDGKMQRNRKSSRCGCQAYMRIVKRAdfdVPEWRVTGFSNIHNH 143
6***************9998874556679*******************9*******************98887676789************ PP
FAR1 88 ela 90
el
Prupe.1G125700.3.p 144 ELL 146
*96 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 403 aa
Download sequence Send
to blast |
MSEGTSLGME DLSQDDIGTI EETAEDTILS RQTSVNLVPF VGQRFVSQEA AYEFYCSFAK 60
QCGFSIRRHR TRGKDGVGRG VTRRDFTCHR GGYPQMKPSE DGKMQRNRKS SRCGCQAYMR 120
IVKRADFDVP EWRVTGFSNI HNHELLKSNE VRLLPAYCSI STDDKSRICM FAKAGMSVRQ 180
MLRLMELEKG VKLGCLPFTE IDVRNLLQSF RNVDRDNDAI DLIAMCKKMK DENPNFKYEF 240
KIDGHNRLEH IAWSYASSVQ LYEAFGDTTV FDTTHRLDAY DMLLGIWLGV DNHGMTCFFG 300
CVLLRDENIQ SFSWALKTFL GFMKGKAPQT MLTDHNMWLK EAIAVDVPQS KHAFCIWHIV 360
AKFSDWFSVL LGSRYDDWKA EFHRLFNLDF VEDFEERWRE MK*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in hypocotyls, rosette and cauline leaves, inflorescences stems, flowers and siliques. {ECO:0000269|PubMed:15591448}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Putative transcription activator involved in regulating light control of development. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated in hypocotyls by far-red light treatment. {ECO:0000269|PubMed:15591448}. |
