PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Prupe.1G106100.1.p | ||||||||
Common Name | PRUPE_ppa026109mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 371aa MW: 41966.6 Da PI: 4.3545 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 56.2 | 1.2e-17 | 7 | 143 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk..leleev.ikevdi..ykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWk 84 p GfrF+P+dee+v +L + + ++k ++l + ++ +++ +k+eP+++ kk+ + ++++yf sk +k ++ ++ +r+ + g+W+ Prupe.1G106100.1.p 7 PFGFRFRPSDEEIVGSFLYPFLVESKpfMSLYNNfLHACNLfgNKTEPSEIWKKYGGpqlVDTDLYFISKLKKLTP-KRMDRRIGNGGTWS 96 89******************97776658555454499999733689*****8544433224557777777766554.5566668999**** PP NAM 85 atgkdkevlsk.....kgelvglkktLvfykgrapkgektdWvmheyrl 128 +t ++k v++k + + +g k+ + + + + + +t W+++ey+l Prupe.1G106100.1.p 97 ETESSKLVHEKvsgnpNPNPIGRKRKFRYEN--KGSEDHTGWLLDEYSL 143 ********999877666667********984..334469********97 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.57E-20 | 4 | 167 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 23.125 | 6 | 168 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.9E-13 | 7 | 143 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 371 aa Download sequence Send to blast |
MEESLVPFGF RFRPSDEEIV GSFLYPFLVE SKPFMSLYNN FLHACNLFGN KTEPSEIWKK 60 YGGPQLVDTD LYFISKLKKL TPKRMDRRIG NGGTWSETES SKLVHEKVSG NPNPNPIGRK 120 RKFRYENKGS EDHTGWLLDE YSLFDGPKND YNQRSYDFDF VICRMRKNDR VGIKATNLKR 180 GSQDKEEKKM TTNKKMKTDD QMGSTESSSQ QGCSSSPIGG DLVGFDPIDL TIFEENTMAD 240 MEQLLGEAWS PSNSEDAVSY DVDPIGETQI NFEKEENTMA DMEQLLGEAW SPSKFENVVS 300 HDVDPIGETQ INFENEENTM ADMEQLLGEA WSPSNFENVV SHDVDPIGET QSSQLSNWSQ 360 AILNQLLVGV * |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Prupe.1G106100.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_021803754.1 | 0.0 | NAC domain-containing protein 96-like, partial | ||||
TrEMBL | A0A251QVG9 | 0.0 | A0A251QVG9_PRUPE; Uncharacterized protein | ||||
STRING | EMJ25859 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF19036 | 2 | 6 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G56530.1 | 2e-09 | NAC domain containing protein 64 |
Link Out ? help Back to Top | |
---|---|
Phytozome | Prupe.1G106100.1.p |
Entrez Gene | 18791515 |