 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Prupe.1G088700.1.p |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
|
Family |
NAC |
Protein Properties |
Length: 322aa MW: 36564.2 Da PI: 6.3738 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.1G088700.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 132.8 | 2.5e-41 | 42 | 167 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
ppG+rF+P d elv yL+kk+++++l+ + i++v++y+++P +L + +++ +e+e+yfF++rdkky++g r+nra+ +gyWkatg +k
Prupe.1G088700.1.p 42 PPGYRFKPLDGELVAIYLRKKIANEPLPP-NKIHDVELYRFNPDTLSEIYESyGEDEMYFFTSRDKKYPNGARPNRAAGDGYWKATGVKKI 131
9*************************999.77**************8544443778********************************887 PP
NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
v+ ++ +vg k++Lvfy+g+ p+g ktdW mhe+++
Prupe.1G088700.1.p 132 VKF-EDVEVGSKTSLVFYRGKPPHGDKTDWKMHEFQV 167
777.9999***************************86 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 322 aa
Download sequence Send
to blast |
MEKQSISSKA SIVTKNGSDL HGGHTGSYDS YYDDASYFDS IPPGYRFKPL DGELVAIYLR 60 KKIANEPLPP NKIHDVELYR FNPDTLSEIY ESYGEDEMYF FTSRDKKYPN GARPNRAAGD 120 GYWKATGVKK IVKFEDVEVG SKTSLVFYRG KPPHGDKTDW KMHEFQVNAP PKRKDRNDMR 180 LDDCVLCRIY NKHNHSKDSN QSNNNGVEIQ EQHNVGSNSQ DNAHVSGEVV DHPPANSHEL 240 TSLLSNQKCY YNTDQSENLN SANCIGFDGP FGVVSISSAL PFQNPQQFNG YQKRQRFCDL 300 PSEFYTNYDQ WLNDTAKDLT H*
|
3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 5e-47 | 40 | 197 | 16 | 170 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 5e-47 | 40 | 197 | 16 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 5e-47 | 40 | 197 | 16 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 5e-47 | 40 | 197 | 16 | 170 | NO APICAL MERISTEM PROTEIN |
3swm_A | 6e-47 | 40 | 197 | 19 | 173 | NAC domain-containing protein 19 |
3swm_B | 6e-47 | 40 | 197 | 19 | 173 | NAC domain-containing protein 19 |
3swm_C | 6e-47 | 40 | 197 | 19 | 173 | NAC domain-containing protein 19 |
3swm_D | 6e-47 | 40 | 197 | 19 | 173 | NAC domain-containing protein 19 |
3swp_A | 6e-47 | 40 | 197 | 19 | 173 | NAC domain-containing protein 19 |
3swp_B | 6e-47 | 40 | 197 | 19 | 173 | NAC domain-containing protein 19 |
3swp_C | 6e-47 | 40 | 197 | 19 | 173 | NAC domain-containing protein 19 |
3swp_D | 6e-47 | 40 | 197 | 19 | 173 | NAC domain-containing protein 19 |
4dul_A | 5e-47 | 40 | 197 | 16 | 170 | NAC domain-containing protein 19 |
4dul_B | 5e-47 | 40 | 197 | 16 | 170 | NAC domain-containing protein 19 |
Search in ModeBase |