 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Prupe.1G068400.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 242aa MW: 27436.3 Da PI: 9.6748 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.1G068400.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 58.8 | 8.9e-19 | 91 | 145 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ ++tkeq + Lee F ++++++ ++++ LA++l+L+ rqV vWFqNrRa+ k
Prupe.1G068400.1.p 91 RKKLRLTKEQSTLLEESFSRHSTLNPARKQSLAEQLNLKPRQVEVWFQNRRARTK 145
678899***********************************************98 PP
|
| 2 | HD-ZIP_I/II | 115.4 | 3.3e-37 | 91 | 179 | 1 | 90 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90
+kk+rl+keq++lLEesF+++++L+p rK++la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+ k+++++l +en+rL+ke + L+ +
Prupe.1G068400.1.p 91 RKKLRLTKEQSTLLEESFSRHSTLNPARKQSLAEQLNLKPRQVEVWFQNRRARTKLKQTEVDCEFWKKRCESLGDENRRLKKELQGLK-S 179
69***********************************************************************************998.3 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 242 aa
Download sequence Send
to blast |
MGGDEEACNT KLALGLGVGE YASRQEMRKK ENPSVCLDLS FALCPKQEVA TLGYHMENRS 60
SLRAMDEDEE SERSIGTNNK SIIMNNKNGV RKKLRLTKEQ STLLEESFSR HSTLNPARKQ 120
SLAEQLNLKP RQVEVWFQNR RARTKLKQTE VDCEFWKKRC ESLGDENRRL KKELQGLKSL 180
NKNEASPLYI QIPKATMLSM CPPCERMVKA HHHNQAAAKN TEDLTVVRKS NKLQGGFDGT 240
N*
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 139 | 147 | RRARTKLKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
