PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.1G063700.1.p | ||||||||
Common Name | PRUPE_ppa023103mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 209aa MW: 24358.5 Da PI: 8.5731 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 55.8 | 1.5e-17 | 10 | 148 | 3 | 127 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkk.....leleevikevdi..ykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyW 83 +GfrF+Ptd+e++ ++L k v +k+ + ++vi+++++ +k eP+++ + + + +++ +yfFs+ +++ +r+t g+W Prupe.1G063700.1.p 10 VGFRFRPTDQEIIGFFLYKMVVEKRpltsmPPYNKVIHKCNLfgNKREPSEIWRDYGGdqlKDQYLYFFSELQRND---LPIQRKTGLGTW 97 7*******************9999888886666678****9833577*****75332222366678****999865...6789999***** PP NAM 84 katgkdkevlsk........kgel..vglkktLvfykgrapkgektdWvmheyr 127 ++t + ++v+++ + l +g k+ + + +g++++ ++ W+++e + Prupe.1G063700.1.p 98 SETVTYQNVKEEvdeingksN--LdvIGRKRKFRYENGSTSE-DHAGWLLDEHS 148 *********998777755443..166*********9988888.89*****9976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.66E-18 | 8 | 175 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 20.371 | 8 | 175 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.7E-13 | 10 | 148 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence Send to blast |
MANSGVTQLV GFRFRPTDQE IIGFFLYKMV VEKRPLTSMP PYNKVIHKCN LFGNKREPSE 60 IWRDYGGDQL KDQYLYFFSE LQRNDLPIQR KTGLGTWSET VTYQNVKEEV DEINGKSNLD 120 VIGRKRKFRY ENGSTSEDHA GWLLDEHSIF KKACKNGTSS NCYDFDVVIC RLRRKGNVDK 180 VREKEEVLFS RSITQEDEKR SIYKGDEN* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.1G063700.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021825151.1 | 1e-119 | NAC domain-containing protein 41-like | ||||
TrEMBL | M5XWG9 | 1e-153 | M5XWG9_PRUPE; Uncharacterized protein | ||||
STRING | EMJ26038 | 1e-154 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF17853 | 3 | 6 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01540.1 | 1e-09 | NAC with transmembrane motif1 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.1G063700.1.p |
Entrez Gene | 18789201 |