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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Prupe.1G051300.1.p |
Common Name | PRUPE_ppa024234mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
MYB |
Protein Properties |
Length: 255aa MW: 29674.3 Da PI: 9.1489 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.1G051300.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 57.6 | 2.9e-18 | 23 | 70 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd ll ++vk++G g+W+++ar g++R +k+c++rw +yl
Prupe.1G051300.1.p 23 KGPWTAEEDGLLTEYVKLHGEGRWNSVARLAGLKRNGKSCRLRWVNYL 70
79********************************************97 PP
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2 | Myb_DNA-binding | 51.9 | 1.8e-16 | 76 | 120 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg T+ E+ +++++++++G++ W+tIar ++ gRt++++k++w+++
Prupe.1G051300.1.p 76 RGQITPHEESIILELHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 120
7888******************.*********.************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 255 aa
Download sequence Send
to blast |
MYLGMMAGHH MGWGIIEEEG WRKGPWTAEE DGLLTEYVKL HGEGRWNSVA RLAGLKRNGK 60 SCRLRWVNYL RPELKRGQIT PHEESIILEL HARWGNRWST IARSLPGRTD NEIKNYWRTH 120 FKKKAKVPSD ASEKAKNRFL RRKQFHNQQH QQQQQHLQVN QEEVKRILAL LDENNDTKMP 180 CFWPQVKQGM ETISTYPHHT TDHQEQCFNY SMLNGNVSVP EASNNEDNFL WDGLWNLNDV 240 HGNFNSTCAT GKAS*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KT323921 | 1e-114 | KT323921.1 Morus alba var. multicaulis isolate LOC122724841 transcription factor GAMYB-like protein (MYB3) mRNA, complete cds. |