PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pp3c9_6339V3.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
Family bZIP
Protein Properties Length: 450aa    MW: 50090.2 Da    PI: 7.4851
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pp3c9_6339V3.1.pgenomeCOSMOSSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.64.1e-16273324253
                       XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                       +++kr++r+ +NRe+ArrsR+RK+  +  Le+ v++L  eN  L ++l+  +
  Pp3c9_6339V3.1.p 273 RDIKRAKRMLSNRESARRSRRRKQTHLSILETQVAQLRVENGNLVQKLQDFN 324
                       689*****************************************99998765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.6E-14272350IPR004827Basic-leucine zipper domain
PfamPF001705.0E-14273324IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.369274326IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.5E-11276326No hitNo description
Gene3DG3DSA:1.20.5.1701.6E-10276326No hitNo description
PROSITE patternPS000360279294IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 450 aa     Download sequence    Send to blast
MEHSPSVDNL LDIFWDVSVN FADKAVTSLS IDQRAPEWSF QEFFKESLTA TPGLGPSRPA  60
CKSRFLIDHA DVKEGKPEKQ DVKESHRSMG TGADKEPLIS SGDLQMYPHS GSSDFSTFMV  120
TRSEDVRIVD DDDPCDAVEG ALNPFFCGFP DVSEGSAAHA RMSGTTIELN REDGFRNPQE  180
YECFLKHKLE IACAAVAITQ HAKASGTRAA EANVKRAEPV SKNHKPGTRA LKRKSPTGDT  240
SVAEVGKSRP ITSSSEVSED EEYGEQHGKE APRDIKRAKR MLSNRESARR SRRRKQTHLS  300
ILETQVAQLR VENGNLVQKL QDFNHKFHEA AIDHRILKAD CEALRAKLSL AKRDLMARHG  360
QISGGQLFAV TSLRYMMPHG MLPVADESDQ FIQQVKGTNP VLHQDHQQSK ASLDKMGRTP  420
SMQHVANQEH LNKRMRSEVC CNTPSWNSY*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1288295RRSRRRKQ
2290295SRRRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024385346.10.0basic leucine zipper 63-like isoform X1
TrEMBLA0A2K1K2910.0A0A2K1K291_PHYPA; Uncharacterized protein
STRINGPP1S220_102V6.10.0(Physcomitrella patens)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP18391639
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.12e-33bZIP family protein