 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Pp3c9_22230V3.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
|
| Family |
C2H2 |
| Protein Properties |
Length: 391aa MW: 44135.2 Da PI: 7.4025 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pp3c9_22230V3.1.p | genome | COSMOSS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 18.7 | 4.8e-06 | 226 | 245 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20
++Cp C+k+F+r n++ H+
Pp3c9_22230V3.1.p 226 FSCPVCNKTFNRYNNMQMHM 245
89*****************9 PP
|
| 2 | zf-C2H2 | 12.3 | 0.00053 | 310 | 332 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
+ C +C+k F + + ++H +++
Pp3c9_22230V3.1.p 310 FMCRKCSKAFAVRGDWRTHEKNC 332
89*****************9987 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 391 aa
Download sequence Send
to blast |
MSSRYNPQNS VAVAHPNIPT TFCEWLKPSQ PGQPLSHYPV AIPYEGVYPG FATGSSSESY 60
FPVQPRSPAP VHRLQYPPAD QYGYSCNSHQ QSHDQFYNQQ TRDEHEWRQR WHLQNNSMSS 120
EPLPFLSLSP PTGRDDLSDS VMRTAILLPE ASHASEESDE NVTVALHIGP PSSDAMSMSR 180
STESPSVYDS LSLAERERLQ RGRGRLLEGE YWIPTPAQIL VGPTQFSCPV CNKTFNRYNN 240
MQMHMWGHGS QYRKGPESLR GTQPTAMLRL PCYCCAPGCR NNIDHPRSKP LKDFRTLQTH 300
YKRKHGIKPF MCRKCSKAFA VRGDWRTHEK NCGKLWFCTC GSDFKHKRSL KDHIRAFGNG 360
HAAHGMDSCE DEEDAVSEED IDEEVSGGSQ *
|
| Expression --
Description ? help
Back to Top |
| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in developing carpels (PubMed:17600712). Expressed in the shoot apical meristem and the replum (PubMed:25039392). {ECO:0000269|PubMed:17600712}. |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional regulator required for normal differentiation of the ovary transmitting tract cells and pollen tube growth. In Arabidopsis, the transmitting tract facilitates the transport of pollen tubes to the ovules for fertilization (PubMed:17600712). May play a role in the regulation of AGL8/FUL, which is required for normal pattern of cell division, expansion and differentiation during morphogenesis of the silique (PubMed:23515580). Plays a role in replum development by the activation of the homeobox protein KNAT1 (PubMed:25039392). {ECO:0000269|PubMed:17600712, ECO:0000269|PubMed:23515580, ECO:0000269|PubMed:25039392}. |
