PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella

Family

G2-like

Protein Properties

Length: 538aa MW: 60382.1 Da PI: 6.8319

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pp3c8_8720V3.3.p	genome	COSMOSS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.7	5.5e-33	80	133	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH++Fv ave+LGG+++AtPk +l+lm+vkgLt++hvkSHLQ+YR+ Pp3c8_8720V3.3.p 80 PRLRWTPDLHRCFVTAVERLGGQDRATPKLVLQLMDVKGLTIAHVKSHLQMYRS 133 8****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	10.948	76	136	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	1.0E-32	76	135	IPR009057	Homeodomain-like
SuperFamily	SSF46689	1.43E-15	78	136	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.4E-23	80	134	IPR006447	Myb domain, plants
Pfam	PF00249	6.5E-8	81	132	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0044212	Molecular Function	transcription regulatory region DNA binding

Plant Ontology ? help Back to Top
PO Term	PO Category	PO Description
PO:0030018	anatomy	gametophore

Sequence ? help Back to Top
Protein Sequence Length: 538 aa Download sequence Send to blast
MQGQVDYSSG SDGGQPGQKW GDNNSGKRHS SSSGEYTPER SSESQNASGE SPRSGYQGGF 60 SGGTGRSGGT VRQYVRSKMP RLRWTPDLHR CFVTAVERLG GQDRATPKLV LQLMDVKGLT 120 IAHVKSHLQM YRSMKNDENG QSGLVQADQM MEYHGTSDTT LLHSSFGLQR NDHFQGQALH 180 VRDSDVTSVP IFPNYLHRQA GILQQFDHHP VVTSRHDGHG EWTNRAFVPS GLPSGHRDWS 240 ENKIQLVEWR KREESLAKSS HMAGNSFSNQ SRIDMHEDEW PTRPSHSVTL DWERKRQQPD 300 SIEGRFAAFQ EGPWLQPGAI IPTMASSQQL EALKKQQEKA SEWDRWQAQG ARQDLPKQSS 360 RHNASEERTS TSLDSRMLFK QLLEPSRSSS NVQEMQHRAR EDEVSHRTPG WPVMFGTENQ 420 RGFEKYAERS RHAFTEDQAD TSSPWTFSQR SEQAITSTQF NEVHDREPDS TLSLYPFSSH 480 LTQSSLSPSK PRQSMSLPDI NEDHHDFPSS LGLSETLQLS SSQGVTLDLT MSLGAPG*

Sequence ? help Back to Top

Protein Sequence Length: 538 aa Download sequence Send to blast

MQGQVDYSSG SDGGQPGQKW GDNNSGKRHS SSSGEYTPER SSESQNASGE SPRSGYQGGF  60
SGGTGRSGGT VRQYVRSKMP RLRWTPDLHR CFVTAVERLG GQDRATPKLV LQLMDVKGLT  120
IAHVKSHLQM YRSMKNDENG QSGLVQADQM MEYHGTSDTT LLHSSFGLQR NDHFQGQALH  180
VRDSDVTSVP IFPNYLHRQA GILQQFDHHP VVTSRHDGHG EWTNRAFVPS GLPSGHRDWS  240
ENKIQLVEWR KREESLAKSS HMAGNSFSNQ SRIDMHEDEW PTRPSHSVTL DWERKRQQPD  300
SIEGRFAAFQ EGPWLQPGAI IPTMASSQQL EALKKQQEKA SEWDRWQAQG ARQDLPKQSS  360
RHNASEERTS TSLDSRMLFK QLLEPSRSSS NVQEMQHRAR EDEVSHRTPG WPVMFGTENQ  420
RGFEKYAERS RHAFTEDQAD TSSPWTFSQR SEQAITSTQF NEVHDREPDS TLSLYPFSSH  480
LTQSSLSPSK PRQSMSLPDI NEDHHDFPSS LGLSETLQLS SSQGVTLDLT MSLGAPG*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	5e-17	81	135	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	5e-17	81	135	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	5e-17	81	135	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	5e-17	81	135	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00301	DAP	Transfer from AT2G40260	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024383451.1	0.0	uncharacterized protein LOC112286102 isoform X2
TrEMBL	A0A2K1K6L7	0.0	A0A2K1K6L7_PHYPA; Uncharacterized protein
STRING	PP1S8_227V6.1	0.0	(Physcomitrella patens)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	1e-31	G2-like family protein

Link Out ? help Back to Top
Phytozome	Pp3c8_8720V3.3.p
Entrez Gene	5916546

Publications ? help Back to Top
Rensing SA, et al. The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants. Science, 2008. 319(5859): p. 64-9 [PMID:18079367]