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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pp3c8_19750V3.1.p |
Common Name | PHYPADRAFT_166697 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
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Family |
GATA |
Protein Properties |
Length: 585aa MW: 64136.2 Da PI: 6.6063 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pp3c8_19750V3.1.p | genome | COSMOSS | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 44.2 | 2.5e-14 | 7 | 41 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C +Cg +TplWR+gp ++ LCnaCG ++r kg+
Pp3c8_19750V3.1.p 7 CGHCGIATTPLWRNGPPEKPVLCNACGSRWRTKGT 41
9***************88888***********997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0030154 | Biological Process | cell differentiation |
GO:0045944 | Biological Process | positive regulation of transcription from RNA polymerase II promoter |
GO:0005634 | Cellular Component | nucleus |
GO:0005667 | Cellular Component | transcription factor complex |
GO:0000977 | Molecular Function | RNA polymerase II regulatory region sequence-specific DNA binding |
GO:0001085 | Molecular Function | RNA polymerase II transcription factor binding |
GO:0001228 | Molecular Function | transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding |
GO:0003682 | Molecular Function | chromatin binding |
GO:0008270 | Molecular Function | zinc ion binding |
Sequence ? help Back to Top |
Protein Sequence Length: 585 aa
Download sequence Send
to blast |
MGKQGPCGHC GIATTPLWRN GPPEKPVLCN ACGSRWRTKG TLSNYMPMHS GGFGGAVSSE 60 GTALKRGRRN NKKMFSGSCK RKEPSESHQE TRAPLRSLTR SLKAAGDDSI STSSLSSNVS 120 GLDDATIIPS LNAYVDVAAS SPLWEGHIPT KRRTLTPRMC TSVDKLSQQF QQAVYDILPP 180 SSTAMHGFSD DLLVDSKPST MADEIGLGSV FIRQPTFAVD KSESRSSMEE ELSQTRVQKH 240 GGPLQQLLNG AERLPSMRGK EKAKEYKKVE SGNLKANNTL LENYPYKKRD VLKSCQSPLV 300 FLELKDILNF DTFTGLLTEQ EQGELMRFLS SEDIAKASES LKEMFTSAEF EGSLNNFQQL 360 LEEGMFESFM LGANLRIPQH FQQLLIQTDL ISSGWMEQFL QLQNRSRRRG GSVDLNKSKE 420 FNKEKGKGYE LHTKSAPAST KQSPGRLPSQ SGANVQSGCL ISASVVSGKT SEPVNFVPDI 480 GNSSSDRAYG FEGGGACYPS NSLLSTEQMS ATDLPDLQAP GSDETEADLL FNMPTNMMTF 540 QDTVLQQPVW SKTKEVDTFQ VDMGSPLTSN MWHMDSAPAE LYWT*
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