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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pp3c7_9340V3.4.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
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| Family |
LBD |
| Protein Properties |
Length: 282aa MW: 30451.2 Da PI: 8.1982 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pp3c7_9340V3.4.p | genome | COSMOSS | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 123.9 | 7.9e-39 | 45 | 146 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92
+C aCk+lrrkC+++C++apyf aeq +++fa+vhk+FGasnv kll ++p +r da+ ++ yeA+ar++dPvyG+v++i++lqqq+++l+a
Pp3c7_9340V3.4.p 45 PCGACKFLRRKCVRGCIFAPYFGAEQgAARFAAVHKIFGASNVAKLLLHIPVPRRCDAVLTISYEAQARLSDPVYGCVATIFALQQQVASLQA 137
7***********************9989***************************************************************** PP
DUF260 93 elallkeel 101
ela+++++l
Pp3c7_9340V3.4.p 138 ELAMVQAQL 146
*****9985 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 282 aa
Download sequence Send
to blast |
MRGGLSNFES VTTGLVRSRS SWGGSSSTFG EGSGRYATSM SSGAPCGACK FLRRKCVRGC 60
IFAPYFGAEQ GAARFAAVHK IFGASNVAKL LLHIPVPRRC DAVLTISYEA QARLSDPVYG 120
CVATIFALQQ QVASLQAELA MVQAQLVNRQ AVVHQIHQHQ QQHHQHHHHL QQQHEQISTM 180
SPGHVPSSAY MQQHEHSQLS PSDISMSIPS GSGSVKEEGN SFLGMQHYGD LGLGSSSLEP 240
MSGNQHSLLE NIHKPRGGGE NIEQTDHEGD LQALALLLRR K*
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