 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Pp3c6_27690V3.5.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
|
| Family |
NAC |
| Protein Properties |
Length: 417aa MW: 46481.9 Da PI: 6.5671 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pp3c6_27690V3.5.p | genome | COSMOSS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 175.9 | 1.1e-54 | 18 | 145 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92
lppGfrFhPtd+elv++yL +k+++ ++ + ++i++vd++k+ePwdLp k+k +ekewyfFs rd+ky+tg+r+nrat++gyWkatgkd++v
Pp3c6_27690V3.5.p 18 LPPGFRFHPTDDELVSFYLVRKISNPQVVV-KTIPNVDLNKCEPWDLPDKAKVGEKEWYFFSLRDRKYPTGQRTNRATDKGYWKATGKDRDV 108
79*************************998.88***************99999*************************************** PP
NAM 93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
+++ ++ lvg+kktLvfy grapkg kt+W+mheyrl
Pp3c6_27690V3.5.p 109 MNSgTHCLVGMKKTLVFYMGRAPKGLKTNWIMHEYRL 145
**855556***************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 417 aa
Download sequence Send
to blast |
MCNGKNTIEM QQDSNLELPP GFRFHPTDDE LVSFYLVRKI SNPQVVVKTI PNVDLNKCEP 60
WDLPDKAKVG EKEWYFFSLR DRKYPTGQRT NRATDKGYWK ATGKDRDVMN SGTHCLVGMK 120
KTLVFYMGRA PKGLKTNWIM HEYRLGSDSS NHFNGQQSHR YKNNEWVVCR VFQKTGGSKT 180
LGLSSTDKAS YQPAAHLHYA LPGNHRDSSP NPTVTDSDDG DTCTAAESCH NSQDSYLDAG 240
VYVAQMLTQG DVTSVGAPQW AAPGSVPMAT PVMDIQPHNT MKESYYNHQN GANMSMLFSP 300
PPQNMVSYPL IPHIGNRMRP KQEPFYPTTC AGEDEAESSQ KLNKLDYAWT GDVLNPEYYP 360
CDSPLTPLQS IVGESGQTSS CLTDGNALHN RAFRGSFSGF QEMAGPIELT TQEWAY*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-53 | 14 | 174 | 13 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-53 | 14 | 174 | 13 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-53 | 14 | 174 | 13 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-53 | 14 | 174 | 13 | 165 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-53 | 14 | 174 | 16 | 168 | NAC domain-containing protein 19 |
| 3swm_B | 1e-53 | 14 | 174 | 16 | 168 | NAC domain-containing protein 19 |
| 3swm_C | 1e-53 | 14 | 174 | 16 | 168 | NAC domain-containing protein 19 |
| 3swm_D | 1e-53 | 14 | 174 | 16 | 168 | NAC domain-containing protein 19 |
| 3swp_A | 1e-53 | 14 | 174 | 16 | 168 | NAC domain-containing protein 19 |
| 3swp_B | 1e-53 | 14 | 174 | 16 | 168 | NAC domain-containing protein 19 |
| 3swp_C | 1e-53 | 14 | 174 | 16 | 168 | NAC domain-containing protein 19 |
| 3swp_D | 1e-53 | 14 | 174 | 16 | 168 | NAC domain-containing protein 19 |
| 3ulx_A | 1e-53 | 9 | 174 | 6 | 168 | Stress-induced transcription factor NAC1 |
| 4dul_A | 1e-53 | 14 | 174 | 13 | 165 | NAC domain-containing protein 19 |
| 4dul_B | 1e-53 | 14 | 174 | 13 | 165 | NAC domain-containing protein 19 |
