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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pp3c5_570V3.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
|
| Family |
NAC |
| Protein Properties |
Length: 416aa MW: 46840.4 Da PI: 6.3438 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pp3c5_570V3.1.p | genome | COSMOSS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 173.5 | 6.5e-54 | 18 | 146 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94
lppGfrFhPtd+elv++yL++kv++ ++ + + i++v ++k+ePwdLp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWkatgkd++v++
Pp3c5_570V3.1.p 18 LPPGFRFHPTDDELVSFYLTRKVKNPHFAV-KSIPNVSLNKCEPWDLPEKAKVGEKEWYFFSLRDRKYPTGIRTNRATEKGYWKATGKDRDVMN 110
79*************************999.78***************99999****************************************9 PP
NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyrle 129
++ lvg+kktLvfy grapkg kt+W+mheyrle
Pp3c5_570V3.1.p 111 YsTHLLVGMKKTLVFYLGRAPKGAKTNWIMHEYRLE 146
845556****************************85 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 416 aa
Download sequence Send
to blast |
MCNGKNTMET KQDCNIELPP GFRFHPTDDE LVSFYLTRKV KNPHFAVKSI PNVSLNKCEP 60
WDLPEKAKVG EKEWYFFSLR DRKYPTGIRT NRATEKGYWK ATGKDRDVMN YSTHLLVGMK 120
KTLVFYLGRA PKGAKTNWIM HEYRLENDLS NHLSNHESHQ SKNHEWVVCR VFQKTVGNKK 180
PSFMYAGMPS YQLADPLDAL PGNHRDNSPN PTVTDSDDCD TCTAAESFYK CQDSLRGGGD 240
HVAQEFRQDH AASVMAHQLP APGSIPIATP AMDLYQYNMM KEPYYNHQNG ADIVKLFSPP 300
PQSMISHPLT TVNGIRIRAK LEPSHNPYSE GEDEVESSQR LNNLDYAWPD DALNAEYFPC 360
DGSLLPLQSV AEDSSQTSTC FTDGSGLYNR SLRGSFSGLS EVAGPAMDVL QEWSY*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-51 | 9 | 180 | 8 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-51 | 9 | 180 | 8 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-51 | 9 | 180 | 8 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-51 | 9 | 180 | 8 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-51 | 9 | 180 | 11 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 1e-51 | 9 | 180 | 11 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 1e-51 | 9 | 180 | 11 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 1e-51 | 9 | 180 | 11 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 1e-51 | 9 | 180 | 11 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 1e-51 | 9 | 180 | 11 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 1e-51 | 9 | 180 | 11 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 1e-51 | 9 | 180 | 11 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 1e-51 | 9 | 180 | 8 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 1e-51 | 9 | 180 | 8 | 171 | NAC domain-containing protein 19 |
| Orthologous Group
? help Back to Top |
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Representative plant | OGRP17 | 15 | 800 |
