PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pp3c5_20330V3.6.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
Family bZIP
Protein Properties Length: 534aa    MW: 58405.8 Da    PI: 10.045
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pp3c5_20330V3.6.pgenomeCOSMOSSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.22.3e-10315356546
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                        k+++r   NR +A+rsR RK+++i eLe+ v +L++e +++ 
  Pp3c5_20330V3.6.p 315 KKAKRILANRQSAQRSRVRKLQYISELERSVNALQTEVSTMS 356
                        899*********************************998886 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-12311375IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.128313359IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.74E-11315369No hitNo description
Gene3DG3DSA:1.20.5.1702.3E-11315381No hitNo description
PfamPF001703.7E-9315360IPR004827Basic-leucine zipper domain
CDDcd147034.86E-23316367No hitNo description
PROSITE patternPS000360318333IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 534 aa     Download sequence    Send to blast
MSSGKGDARQ VNWSHPMSSS SQLPPKSPGA YSMFGSGSSL FESDLLASLP LRGGSHHKRT  60
PSAGYLPNVV PLWLEDILES PDGEVVVRKG SHRRSSSDSV AFLDSPQDLT NFVANVTEEE  120
EFVLRDPPPP IARPSHRRGV SADLKSSQYD VPGPQRPSHR RGMSADYNNN RLDKEQLMSV  180
LSELEPFQTQ QPRQRPEKHI PRGVGPPGMV RPGSSNDSWN PEKGKKHVTL PVSNSTSDSV  240
SHERGRNQKS NVTTSENRST GSDSNSHSDE SHDELQSGHL GREKFEQEAQ SKREGDGSRQ  300
AQGDGTEVDP SLDPKKAKRI LANRQSAQRS RVRKLQYISE LERSVNALQT EVSTMSPQVG  360
FYDHRRALLT AENVLLKQKL AALSQSQRYK EAQNESLKKE VQRLLQIFNQ QNQSQQQIQV  420
VQHRPLSPNA FEISQQQLSK LDLGPNIPKP KSPDLYSSGV NGKNSSGLSS SLFAGGVVSP  480
QMRSGSNVVR PPSHPAKVGV NTSCMAPSSG KNLEGRMMGG SGTLPSDFMV HNS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024376312.10.0uncharacterized protein LOC112282640
RefseqXP_024376313.10.0uncharacterized protein LOC112282640
RefseqXP_024376314.10.0uncharacterized protein LOC112282640
RefseqXP_024376315.10.0uncharacterized protein LOC112282640
TrEMBLA0A2K1KKF40.0A0A2K1KKF4_PHYPA; Uncharacterized protein
STRINGPP1S93_157V6.10.0(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.22e-36bZIP family protein