PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella

Family

G2-like

Protein Properties

Length: 215aa MW: 23270.2 Da PI: 7.198

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pp3c4_16540V3.3.p	genome	COSMOSS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	33	1.4e-10	1	23	33	55
G2-like 33 lelmkvkgLtlehvkSHLQkYRl 55 +++m vkgLtl+h+kSHLQk+Rl Pp3c4_16540V3.3.p 1 MRVMAVKGLTLYHLKSHLQKFRL 23 789*******************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	2.8E-9	1	24	IPR009057	Homeodomain-like
Pfam	PF14379	2.3E-24	66	112	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009567	Biological Process	double fertilization forming a zygote and endosperm
GO:0010628	Biological Process	positive regulation of gene expression
GO:0005634	Cellular Component	nucleus
GO:0043565	Molecular Function	sequence-specific DNA binding

Plant Ontology ? help Back to Top
PO Term	PO Category	PO Description
PO:0000006	anatomy	plant protoplast
PO:0025017	anatomy	plant spore
PO:0030003	anatomy	protonema
PO:0030018	anatomy	gametophore

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence Send to blast
MRVMAVKGLT LYHLKSHLQK FRLGKQLHRD SSGHEGAKGG SADIQVTISA CSDGPSTPKP 60 QNQESFQISE AIRMQMEVQR RLQEQLEIQR QLQLRIEAQG KYLQSILEKA KEALGSHIGA 120 SPGLETVHAE LTELASKVNS EPMNMCFPPL TLPELPTQSA DARIGNLPRQ ESRVSDSSSQ 180 KSHVTNGAAN PEDSGGASAS CENQASIGIQ KFET*

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Ppa.15935	0.0	gametophore\| protonema

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator (PubMed:26586833). Acts redundantly with PHR1 as a key component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). {ECO:0000269\|PubMed:26586833}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated in roots by low Pi. {ECO:0000269\|PubMed:26586833}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024373739.1	1e-156	protein PHR1-LIKE 3-like
Swissprot	Q94A57	1e-40	PHL2_ARATH; Protein PHR1-LIKE 2
TrEMBL	A0A2K1KNR0	1e-154	A0A2K1KNR0_PHYPA; Uncharacterized protein
STRING	PP1S13_270V6.1	1e-155	(Physcomitrella patens)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24120.1	5e-24	G2-like family protein

Link Out ? help Back to Top
Phytozome	Pp3c4_16540V3.3.p
Entrez Gene	5917580

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Rensing SA, et al. The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants. Science, 2008. 319(5859): p. 64-9 [PMID:18079367]