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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Pp3c4_16540V3.1.p |
| Common Name | PHYPADRAFT_175642 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
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| Family |
G2-like |
| Protein Properties |
Length: 295aa MW: 31808.6 Da PI: 6.9568 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pp3c4_16540V3.1.p | genome | COSMOSS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 107.1 | 9.8e-34 | 49 | 103 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kprlrWtpeLHerFv+ave+LGG++kAtPk+++++m vkgLtl+h+kSHLQk+Rl
Pp3c4_16540V3.1.p 49 KPRLRWTPELHERFVDAVERLGGADKATPKSVMRVMAVKGLTLYHLKSHLQKFRL 103
79****************************************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009567 | Biological Process | double fertilization forming a zygote and endosperm |
| GO:0010628 | Biological Process | positive regulation of gene expression |
| GO:0005634 | Cellular Component | nucleus |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 295 aa
Download sequence Send
to blast |
MYQVQGKNYT NMELVPANGA QSASSNQDIP SAYGATFSSD GGVSSADPKP RLRWTPELHE 60
RFVDAVERLG GADKATPKSV MRVMAVKGLT LYHLKSHLQK FRLGKQLHRD SSGHEGAKGG 120
SADIQVTISA CSDGPSTPKP QNQESFQISE AIRMQMEVQR RLQEQLEIQR QLQLRIEAQG 180
KYLQSILEKA KEALGSHIGA SPGLETVHAE LTELASKVNS EPMNMCFPPL TLPELPTQSA 240
DARIGNLPRQ ESRVSDSSSQ KSHVTNGAAN PEDSGGASAS CENQASIGIQ KFET*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 8e-21 | 49 | 105 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 8e-21 | 49 | 105 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 8e-21 | 49 | 105 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 8e-21 | 49 | 105 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional activator (PubMed:26586833). Probable component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). Required for female gametophyte development and function (PubMed:15634699). {ECO:0000269|PubMed:15634699, ECO:0000269|PubMed:26586833}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated in roots by low Pi. {ECO:0000269|PubMed:26586833}. |
| Orthologous Group
? help Back to Top |
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Representative plant | OGRP78 | 17 | 262 |
