 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Pp3c4_16130V3.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
|
| Family |
C2H2 |
| Protein Properties |
Length: 305aa MW: 34401.5 Da PI: 9.821 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pp3c4_16130V3.1.p | genome | COSMOSS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 15.2 | 6.1e-05 | 99 | 121 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23
+C++C+++F++ +L+ H + H
Pp3c4_16130V3.1.p 99 TCSICTRVFPTTRLLNLHVSEtH 121
6*****************99877 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 305 aa
Download sequence Send
to blast |
MDLGKMKDGA EQTSPLFRAW VAARRPFKVD SPFFAAGNVE RELVAKQISL EITEEEKKHI 60
VQSEEEQLWE IFCPIVGCRT KLKGVGELES HYLSRHSATC SICTRVFPTT RLLNLHVSET 120
HDSFFRAKVA LNYPMYECLM EGCSARFLSD SNRHQHLVDK HHFPRSFRFH VKKHASQKQR 180
QRQKAHQPSN SGSTPKQSKK NQRAKAASES APDVHTDRKD YESTTPSETQ NQDTPMDVDE 240
LVTAVSRLST VSQDETPSVL RFGHRRGRGV PFGQKSRGSG RGRGRGRSGR DQEDDSPPLQ 300
SIST*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 276 | 285 | RGSGRGRGRG |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT5G14140.1 | 8e-70 | zinc ion binding;nucleic acid binding;zinc ion binding |
