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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Pp3c26_4660V3.10.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
|
| Family |
NAC |
| Protein Properties |
Length: 390aa MW: 43551.9 Da PI: 6.3225 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pp3c26_4660V3.10.p | genome | COSMOSS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 178.9 | 1.3e-55 | 20 | 147 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
lppGfrFhPtdeelv++yL++k+++ ++++ ++i evd++k+ePwdLp k++ +ekewyfFs rd+ky+tg r+nrat++gyWkatgkdk+
Pp3c26_4660V3.10.p 20 LPPGFRFHPTDEELVSYYLTRKIRNPDFSV-RAIGEVDLNKCEPWDLPVKATFGEKEWYFFSLRDRKYPTGLRTNRATEKGYWKATGKDKD 109
79****************************.89***************888889************************************* PP
NAM 92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
vl++ +++lvg+kktLvfy+grapkgekt+W+mheyr+
Pp3c26_4660V3.10.p 110 VLRSgDHSLVGMKKTLVFYRGRAPKGEKTSWIMHEYRV 147
**9967778***************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 390 aa
Download sequence Send
to blast |
MATMCVGKNS LEMQGSNMEL PPGFRFHPTD EELVSYYLTR KIRNPDFSVR AIGEVDLNKC 60
EPWDLPVKAT FGEKEWYFFS LRDRKYPTGL RTNRATEKGY WKATGKDKDV LRSGDHSLVG 120
MKKTLVFYRG RAPKGEKTSW IMHEYRVESD SSNQTNQELP RSKDEWVVCR VFYKNGGGRH 180
KYVLHSGLDS LPNNSDSAIP GHLESSPNPS VNEDGDCDTR VKGAEREVTW MGGPKLGVSI 240
TPTRLKSIAA SSPDTNISLY NQNPNFLDFG ISPHGAMSNM TSLKSFNRNG NRMRLKDEPY 300
YACEGEDGAQ TNQGLGLDYS WCGGVIYQDM SLEGPIAPFL SLTAEIDCIT ESFSEEQQAR 360
PPSRIRSLSG VPEIHGPMDT LQEIITSTC*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-56 | 16 | 179 | 13 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-56 | 16 | 179 | 13 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-56 | 16 | 179 | 13 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-56 | 16 | 179 | 13 | 170 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 2e-56 | 16 | 179 | 16 | 173 | NAC domain-containing protein 19 |
| 3swm_B | 2e-56 | 16 | 179 | 16 | 173 | NAC domain-containing protein 19 |
| 3swm_C | 2e-56 | 16 | 179 | 16 | 173 | NAC domain-containing protein 19 |
| 3swm_D | 2e-56 | 16 | 179 | 16 | 173 | NAC domain-containing protein 19 |
| 3swp_A | 2e-56 | 16 | 179 | 16 | 173 | NAC domain-containing protein 19 |
| 3swp_B | 2e-56 | 16 | 179 | 16 | 173 | NAC domain-containing protein 19 |
| 3swp_C | 2e-56 | 16 | 179 | 16 | 173 | NAC domain-containing protein 19 |
| 3swp_D | 2e-56 | 16 | 179 | 16 | 173 | NAC domain-containing protein 19 |
| 4dul_A | 1e-56 | 16 | 179 | 13 | 170 | NAC domain-containing protein 19 |
| 4dul_B | 1e-56 | 16 | 179 | 13 | 170 | NAC domain-containing protein 19 |
| Orthologous Group
? help Back to Top |
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Representative plant | OGRP17 | 15 | 800 |
