 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Pp3c26_13140V3.2.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
|
| Family |
C2H2 |
| Protein Properties |
Length: 273aa MW: 30388.9 Da PI: 7.4757 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pp3c26_13140V3.2.p | genome | COSMOSS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 14.6 | 9.4e-05 | 68 | 90 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C+ C++ F++ L H+++H
Pp3c26_13140V3.2.p 68 YSCSFCHREFRTAQALGGHMNVH 90
99*******************99 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 273 aa
Download sequence Send
to blast |
MATRTMQQTE PLWPAFMSSW VAPNQCYVGD KTWNKRLPSV MDNDSWEVRA FAEDTSCISG 60
AQWPPRFYSC SFCHREFRTA QALGGHMNVH RRERQHANQL AQLRIASSVA SLSHIPRSKI 120
DISDPSVEST EFSWLQSVSK SPRSLSPMQP CAPTITRNLF SQNSLSSSHL DLSMSGSTFN 180
SSSTLSTSPP SQESISSNST ETAHEIGTKP LLQSIPDIVC ETLTQQNFWT MSSRGSNAYH 240
PYERSRCRSK VLGDKEDMLD LELRLGQSSC AV*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1njq_A | 5e-11 | 63 | 90 | 2 | 29 | superman protein |
| 2l1o_A | 5e-11 | 63 | 90 | 2 | 29 | Transcriptional regulator SUPERMAN |
