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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pp3c23_19420V3.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
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Family | bZIP | ||||||||
Protein Properties | Length: 452aa MW: 47361.9 Da PI: 9.8593 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 48.3 | 2.2e-15 | 369 | 415 | 5 | 51 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 +r+rr++kNRe+A rsR+RK+a++ eLe +v +L++eN++L+k ee Pp3c23_19420V3.2.p 369 RRQRRMIKNRESAARSRARKQAYTVELEAEVSQLKEENMRLRKHQEE 415 79****************************************65444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.6E-13 | 365 | 430 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.036 | 367 | 415 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.97E-25 | 369 | 423 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.6E-13 | 369 | 415 | No hit | No description |
Pfam | PF00170 | 3.8E-13 | 369 | 419 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.81E-10 | 369 | 415 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 372 | 387 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 452 aa Download sequence Send to blast |
MGANGASSSG VSNGLASSSL AGAGSRFNSL APQSPIYSLT LDEFQTALSE PAKNLGSMNM 60 DEFVKNIWSA VWTNDESQAM AEAMGPLGDA GQGSGELSRQ PSLQKQGSIS LPRTLSMKTV 120 DEVWNDIHRG LSEQSEAGGE PVGGGSEQER TKTFKKMTLE DFLVKAGVVM EDSEAATQGF 180 SSFMGGAGNQ EKSRIAHGGR AGEIVPTLSL SPANVMTSQA TIGSMQIDAY NKNQAAGTQQ 240 QQQQQQADWL RSIAQQQAAA EAAYANVAAK RMGNGAGPMV GMGGLRMGGA IGPSMGPGMG 300 GAMTGGGLGL GLGGGMTANM GMGANSPPSP DSDGGRSGLS LSPIQYGADG SVRGRKRGSD 360 GAVEKVVERR QRRMIKNRES AARSRARKQA YTVELEAEVS QLKEENMRLR KHQEEEAERR 420 RKQITEILQS ATKVAGVEKA KGLRRTRTAT W* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024363129.1 | 0.0 | ABSCISIC ACID-INSENSITIVE 5-like protein 5 isoform X3 | ||||
TrEMBL | A0A2K1IK10 | 0.0 | A0A2K1IK10_PHYPA; Uncharacterized protein | ||||
STRING | PP1S49_161V6.1 | 0.0 | (Physcomitrella patens) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP3984 | 10 | 24 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49720.2 | 1e-33 | abscisic acid responsive element-binding factor 1 |
Link Out ? help Back to Top | |
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Phytozome | Pp3c23_19420V3.2.p |