 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Pp3c22_1400V3.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
|
| Family |
C2H2 |
| Protein Properties |
Length: 405aa MW: 43210.6 Da PI: 8.8899 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pp3c22_1400V3.1.p | genome | COSMOSS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 11.3 | 0.0011 | 35 | 58 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23
+kC+ C+k s+ s ++ H H
Pp3c22_1400V3.1.p 35 FKCHVCHKKLSSASGMVIHVLQvH 58
89*****************87655 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009910 | Biological Process | negative regulation of flower development |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0042803 | Molecular Function | protein homodimerization activity |
| GO:0046872 | Molecular Function | metal ion binding |
| GO:0046982 | Molecular Function | protein heterodimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 405 aa
Download sequence Send
to blast |
MGKKKKKTYK VWCFYCEREF EDEKILIQHQ KAKHFKCHVC HKKLSSASGM VIHVLQVHKE 60
SVSKIPNAKP EREALTDLEI YGMEGIPAEI LAAHDGDYDE DENPSKVARV EVPPLLPFVG 120
GGLMGSNAIG MAPQPMYTAM QPMYRPSPGL GPRPPPNWQP QPPPPQGWNG PPLPGQPGPP 180
RMPQPPQPLF PIQGQRPPTP SQPPSQPLFP IRPPLPPGSS LAPPRPLFPV TQPPNGPPPP 240
PPPSAPPLSP AGSLVKPPQP SPGSNQSSIN GSPGIAPPLP SPGASSGMNM GPGSNARLPP 300
PPYGALSGPP PPPPCSHMYS SGPNTGGPSI GPPPVISNKP PGVAGGTNEV YLVWDDEFFS 360
MEERRLSLQK YQVHDETIQM SSVDAAIDKR ILEGRLAGRM SFHV*
|
| Expression --
Description ? help
Back to Top |
| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Barely detectable in 3-days-old seedling, and then increases. {ECO:0000269|PubMed:17138694}. |
| Uniprot | TISSUE SPECIFICITY: Expressed in root, shoot apex, leaves, stem and flowers. Expressed in expanding leaves, in the vasculature of fully expanded leaves, in the inflorescence, throughout young floral primordia, in the carpels of older flowers and in fertilized ovules. {ECO:0000269|PubMed:17079264, ECO:0000269|PubMed:17138694}. |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Sequence-specific DNA binding factor that recognizes the 5'-CCAAATTTTAAGTTT-3' sequence. Recruits the FRI-C complex to the FLC promoter. Required for FRI-mediated FLC activation, but has no effect on the expression of MAF1, MAF2, MAF3, MAF5, UFC and CO. Dispensable for the reactivation of FLC in early embryogenesis, but required to maintain high levels of FLC expression in later embryonic and vegetative development. {ECO:0000269|PubMed:17079264, ECO:0000269|PubMed:17138694, ECO:0000269|PubMed:19121105, ECO:0000269|PubMed:21282526}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Not regulated by photoperiod or vernalization. {ECO:0000269|PubMed:17079264, ECO:0000269|PubMed:17138694}. |
