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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pp3c21_17550V3.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
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Family |
Trihelix |
Protein Properties |
Length: 500aa MW: 56010.8 Da PI: 7.0679 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pp3c21_17550V3.1.p | genome | COSMOSS | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 94.7 | 8.8e-30 | 221 | 305 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
rW++ e+laLi++r++++ ++r++ k+plWe+vs+k++e g++rs k+Ckek+en++k+ykk k+g+ +r++++s +++f ql+a
Pp3c21_17550V3.1.p 221 RWPRAETLALIQIRSDLDANFRDSGVKGPLWEDVSRKLAEMGYNRSGKKCKEKFENIHKYYKKSKDGRAGRQDGKS--YRFFAQLDA 305
8*********************************************************************866665..******985 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 500 aa
Download sequence Send
to blast |
MQSTGQYGVS DSPQFLVARA PHIFSISHDS ISLSPPAGHA HQGHHPHQHH LPHHLQAPHH 60 LYGGHLSHQP HPSLQQIHQP QSSHASHAQH LQHAQHPQHS QHAPHSQHPA HPLPQLQQAQ 120 QQPASHASSS HQDVPQQQLQ QVQQQEEQHK QLVREQQQAQ EQQHAQEQMV QQLGLGDPDS 180 PDAPSPIASR PSPTNYSKLL LSAQQDDEGL EEERGNSGGN RWPRAETLAL IQIRSDLDAN 240 FRDSGVKGPL WEDVSRKLAE MGYNRSGKKC KEKFENIHKY YKKSKDGRAG RQDGKSYRFF 300 AQLDALFGGQ QTSTQVETDT AAAVLLIGNA PPLGISPTDQ DLNVSVQRAS EVSTGVTVSK 360 SSDDDYDGPG SGLRDNQDKK KNRKRKQIES VKFGTPKLDF FETLMKNMID KQEAMQMRFL 420 EMIEKMEQDR QAKEDAWRRQ EVARWQREHD LRAQENAIAA ARDSALISFL QKVTGQNIQL 480 SNFSTPLPTG IPPTRESEE*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 379 | 386 | KKNRKRKQ |