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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pp3c21_16050V3.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
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| Family |
LBD |
| Protein Properties |
Length: 357aa MW: 38522 Da PI: 8.3546 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pp3c21_16050V3.1.p | genome | COSMOSS | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 99.8 | 2.5e-31 | 2 | 103 | 1 | 97 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqq 86
+C++C+vlr++C+++C+l+p++ +++q +++ +v+k+FG++ ++++++a+pe++r+++++sl+yeA+ r+ +Pv Gavg+++++++q
Pp3c21_16050V3.1.p 2 SCNGCRVLRKGCSESCILRPCLqwidsADAQGHATVFVAKFFGRAGLMSFITAVPENQRPALFQSLLYEACGRTVNPVFGAVGLLWAGNWQ 92
6*********************9998666778*********************************************************** PP
DUF260 87 leqlkaelall 97
++q+++e++l
Pp3c21_16050V3.1.p 93 VCQAAVETVLK 103
*****998765 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 357 aa
Download sequence Send
to blast |
MSCNGCRVLR KGCSESCILR PCLQWIDSAD AQGHATVFVA KFFGRAGLMS FITAVPENQR 60
PALFQSLLYE ACGRTVNPVF GAVGLLWAGN WQVCQAAVET VLKGGVLKAP SSCSLGFSAL 120
PQGLLHPSNP GKDTSVTSKG RDSLLPSLIT SAKGNIPDLC KVRVGAGPIL EQYQRTNGYE 180
SKDHDAAAVK SSWDRKWDIN VQQQEWPKHQ QLDTAKGNVK SHMVAWPEAL GNIVHKVGEK 240
RDRDFSGAQV LVPAPRRLKP CLAIEYGMSM KECAVYDDQE TVVGSTEHLD LGLTLKVKDG 300
KGGQITGFKT VYSPSDSVNS EGSVTSLDTT PRHVHHTSFS SPMSGGDMDR KLLLLL*
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