PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pp3c1_5800V3.6.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
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Family | bZIP | ||||||||
Protein Properties | Length: 846aa MW: 96642.2 Da PI: 4.4925 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 20.7 | 9.3e-07 | 681 | 716 | 27 | 62 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 27 eieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 ei+eL+ekv++Le+eN++L +e++ +k+ ak +se Pp3c1_5800V3.6.p 681 EIAELQEKVEALENENERLYNEIDGMKEDLAKAESE 716 899**************************9988776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 846 aa Download sequence Send to blast |
MYQYDPYGYQ AYNNPQPEHY APPGLPQPSR PSTLTDPAYS YSDQYAPYPG YDSQSYGSQL 60 NSFQQNYYPS NSPATPEDYS APYAHSSSLQ HSSSYNYPHS EQQPTSSLSH SAASQYPPAA 120 PPDSSFYPGV SSGPYTTTPG ESTSWTSNFA SLLSKPESVK HDEPHGCHSV PKPDDKKENI 180 SFSVNEAQAI IRNLKETNHD LKLQLSNSRD AINKVASEKD AKIQELQREL DAAKRKISSH 240 VPVGPLEAIA ASEREWTQRQ SLKEQENREL LAQRERDWAV KLSNSDQEIS ALRIKIAKLE 300 SDTDSRRVLL LETNAAQEAE LIKLREVAKH REEELMRQKE EIEKREQELM KLRDETNKLY 360 DEITQMVDEK EAISLSITKL EGEKSDLEEQ LTQLKQSFDE LMAKSNATAD EKKDLLRSNT 420 ALETALEECR MQIETLESEQ LPTLNSQIEL LNTLHEEAED KIAQYENKIT QLENELEDAV 480 NAREIAERKL GDAEQREMET SLRLAGEHRS AIEEIQKLRF QLDSHVSDTS DNEKLESEKR 540 SLEQKLAEVE GEKKKALDRI SDLEESLKAV TARKDELDEE LAIMEETMDR EAQEHETVEK 600 DVKLKIEKLE KEVSILTRDK NDTEKLLHAT EDMLRLLKED ISQKREAGTT ARGGEDLDEE 660 KAMLMAKFAE LEKDNVLMND EIAELQEKVE ALENENERLY NEIDGMKEDL AKAESEAIAK 720 RRMEREIKGL KFDLAKGAAK IENFEVEIQA LNSQIEVLNK ELHDANVKMY DMEDNRSDLE 780 QQFKELLNDK KNAGVKAAQL GEELLKKEME IKEMKDQVRD ISDKFLNVVA ERDDLEQANR 840 LLRNK* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ppa.5296 | 0.0 | protonema |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024383851.1 | 0.0 | myosin-11-like | ||||
Refseq | XP_024383862.1 | 0.0 | myosin-11-like | ||||
Refseq | XP_024383870.1 | 0.0 | myosin-11-like | ||||
Refseq | XP_024383878.1 | 0.0 | myosin-11-like | ||||
Refseq | XP_024383888.1 | 0.0 | myosin-11-like | ||||
TrEMBL | A0A2K1L730 | 0.0 | A0A2K1L730_PHYPA; Uncharacterized protein | ||||
STRING | PP1S45_229V6.2 | 0.0 | (Physcomitrella patens) |
Link Out ? help Back to Top | |
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Phytozome | Pp3c1_5800V3.6.p |