PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pp3c1_33080V3.7.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
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Family | bZIP | ||||||||
Protein Properties | Length: 525aa MW: 56946.4 Da PI: 6.1151 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 41 | 4.1e-13 | 260 | 304 | 5 | 49 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 kr +r+ +NR +A+rsRqR+++++++Le ++L eN++L+k+l Pp3c1_33080V3.7.p 260 KRKKRMLSNRASAQRSRQRRQERLDQLEVLTAQLRVENSTLQKKL 304 9*****************************************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 9.1E-13 | 256 | 320 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 5.8E-10 | 258 | 304 | No hit | No description |
PROSITE profile | PS50217 | 10.841 | 258 | 304 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.4E-11 | 260 | 304 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 7.74E-9 | 260 | 309 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 263 | 278 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 525 aa Download sequence Send to blast |
MYRLDPTLIP QHSPLAQPRM LSVLPEAANR LDLTSAIAHE LQRINSQPGW LPWNQQLGEI 60 QCSHEPANGL QLPPDSLLSH QNAGSAGRPI PQYIPRFDEA LGPPAQQLPT RLDLYSPDLE 120 PLASAHQGFY SRADNGVPRD VGAHQRTRLH PGHQALDAGG RVESMARSVS PWIERMMQAD 180 VTPTPSPSLG ISTSLSLSQR GLGEASCVAS QTAELQSCHS SDVQRSAFQC GVQRDQSTAE 240 ASAELCTDDE DWEARPLDEK RKKRMLSNRA SAQRSRQRRQ ERLDQLEVLT AQLRVENSTL 300 QKKLGVAVQV AKKFEDENKA LQRRVERLSK ELESGKARMP TERAFDECAS SQQTTCTSSC 360 EMVGGRTSVD PNVMRSGNDG ESIPSMSAGS AAATETETKG VEGASNGKHG DGVSSVRKSL 420 SEWRMGKKRT LEESVSFGGS HSAPMGNCMG PGSASGELWT SSHTSLARAG SPGTGVEREC 480 GNVLESMRSP FGGSFGMEAT MKEDASQMDC MEADRWLEFA ECFK* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ppa.14701 | 0.0 | gametophore| sporophyte |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024377712.1 | 0.0 | uncharacterized protein LOC112283346 isoform X2 | ||||
TrEMBL | A0A2K1LAP8 | 0.0 | A0A2K1LAP8_PHYPA; Uncharacterized protein | ||||
STRING | PP1S355_22V6.1 | 0.0 | (Physcomitrella patens) |
Link Out ? help Back to Top | |
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Phytozome | Pp3c1_33080V3.7.p |