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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pp3c1_32440V3.2.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
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Family |
ERF |
Protein Properties |
Length: 240aa MW: 26278.8 Da PI: 7.5701 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pp3c1_32440V3.2.p | genome | COSMOSS | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 14 | 0.00014 | 26 | 48 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y C+ Cg +F++ +L H+++H
Pp3c1_32440V3.2.p 26 YMCKVCGNVFTSGQSLGGHMNVH 48
89*******************99 PP
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2 | AP2 | 48.3 | 2.6e-15 | 75 | 122 | 3 | 53 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53
ykGVr++k +++WvAeIr p+ +++++lg++ t+ eAa a++ a k++
Pp3c1_32440V3.2.p 75 YKGVRYRKGQHKWVAEIRPPKG---SRTWWLGTYSTPREAAYAYDVAIKYF 122
9******************843...5********************99875 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
Protein Sequence Length: 240 aa
Download sequence Send
to blast |
MASSGSDSDG SSDGSPARTS SFSRTYMCKV CGNVFTSGQS LGGHMNVHRK DQRSPRASTA 60 SGAGFTLGGE NTESYKGVRY RKGQHKWVAE IRPPKGSRTW WLGTYSTPRE AAYAYDVAIK 120 YFGSKTSLNF EGHPIYEQIP KIPDDLPDQD FAAKLRKVVK KYGKLAMQSG PGPSTQEPAQ 180 EVDIDDFPDP GPPLSPFYTP FDCEEDVNNY SASAQYGSGH GYSSHQSCNW PYNSDHNFR*
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